Last updated on 2025-12-07 07:50:36 CET.
| Package | ERROR | WARN | OK |
|---|---|---|---|
| cmmr | 13 | ||
| ggpca | 1 | 12 | |
| ggvolcano | 1 | 12 | |
| oglcnac | 1 | 12 | |
| omicsTools | 5 | 8 | |
| rconf | 1 | 12 | |
| RJSONIO | 13 | ||
| ShinyLink | 5 | 8 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, OK: 12
Version: 0.1.3
Check: package dependencies
Result: ERROR
Packages required but not available: 'config', 'golem'
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, OK: 12
Version: 0.1.4
Check: package dependencies
Result: ERROR
Packages required but not available: 'config', 'golem'
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, OK: 12
Version: 0.1.5
Check: package dependencies
Result: ERROR
Package required but not available: ‘DT’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 5, OK: 8
Version: 1.0.5
Check: package dependencies
Result: ERROR
Packages required but not available: 'config', 'DT', 'golem'
Package suggested but not available for checking: ‘spelling’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [8s/39s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(omicsTools)
This is omicsTools version 1.0.5.
omicsTools is free software and comes with ABSOLUTELY NO WARRANTY.
Please use at your own risk.
>
> test_check("omicsTools")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [8s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(omicsTools)
This is omicsTools version 1.0.5.
omicsTools is free software and comes with ABSOLUTELY NO WARRANTY.
Please use at your own risk.
>
> test_check("omicsTools")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [5s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(omicsTools)
This is omicsTools version 1.0.5.
omicsTools is free software and comes with ABSOLUTELY NO WARRANTY.
Please use at your own risk.
>
> test_check("omicsTools")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.0.5
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [6s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(omicsTools)
This is omicsTools version 1.0.5.
omicsTools is free software and comes with ABSOLUTELY NO WARRANTY.
Please use at your own risk.
>
> test_check("omicsTools")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64
Current CRAN status: WARN: 1, OK: 12
Version: 0.1.2
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.2
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13
Current CRAN status: ERROR: 5, OK: 8
Version: 0.2.2
Check: package dependencies
Result: ERROR
Packages required but not available: 'config', 'DT', 'golem', 'htmlwidgets'
Packages suggested but not available for checking:
'knitr', 'rmarkdown', 'spelling'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.2
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [16s/36s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ShinyLink)
>
> test_check("ShinyLink")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2.2
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [16s/26s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ShinyLink)
>
> test_check("ShinyLink")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.2
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/1s]
Running ‘testthat.R’ [9s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ShinyLink)
>
> test_check("ShinyLink")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.2.2
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [11s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ShinyLink)
>
> test_check("ShinyLink")
Loading required package: shiny
Saving _problems/test-golem_utils_ui-99.R
Saving _problems/test-golem_utils_ui-105.R
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-golem-recommended.R:72:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
Differences:
lines(actual) vs lines(expected)
- "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
- " <span class=\"action-label\">go</span>"
- "</button>"
+ "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
[ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64