CRAN Package Check Results for Maintainer John Blischak <jdblischak at gmail.com>

CRAN Package Check Results for Maintainer ‘John Blischak <jdblischak at gmail.com>’

Last updated on 2025-12-07 07:50:31 CET.

Package	ERROR	OK
faviconPlease		13
OmicNavigator	1	12
workflowr	1	12

Version: 1.16.0
Check: tests
Result: ERROR Running ‘tinytest.R’ [2s/3s] Running the tests in ‘tests/tinytest.R’ failed. Complete output: > # Test files in inst/tinytest/ > if (requireNamespace("tinytest", quietly = TRUE)) { + suppressMessages(tinytest::test_package("OmicNavigator")) + } testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 0 tests testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 6 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 6 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 7 tests <1b>[0;32mOK<1b>[0m testAdd.R..................... 7 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m1.9s<1b>[0m testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests testApp.R..................... 0 tests Error in utils::install.packages(tmpPkgDir, lib = library, repos = NULL, : (converted from warning) installation of package '/tmp/Rtmps6UiFe/ONstudyABC' had non-zero exit status Calls: suppressMessages ... suppressMessages -> withCallingHandlers -> installStudy -> <Anonymous> Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.16.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘OmicNavigatorAPI.Rnw’ using Sweave OmicNavigator R package version: 1.16.0 The app is not installed. Install it with installApp() Installing study "ABC" in /tmp/RtmprbGkvM/file1606a264232c7b Exporting study "ABC" as an R package Note: No maintainer email was specified. Using the placeholder: Unknown <unknown@unknown> Calculating pairwise overlaps. This may take a while... Exported study to /tmp/RtmprbGkvM/ONstudyABC Error: processing vignette 'OmicNavigatorAPI.Rnw' failed with diagnostics: chunk 3 (label = test-data) Error in utils::install.packages(tmpPkgDir, lib = library, repos = NULL, : (converted from warning) installation of package ‘/tmp/RtmprbGkvM/ONstudyABC’ had non-zero exit status --- failed re-building ‘OmicNavigatorAPI.Rnw’ --- re-building ‘OmicNavigatorUsersGuide.Rnw’ using Sweave OmicNavigator R package version: 1.16.0 The app is not installed. Install it with installApp() Installing study "vignetteExample" in /tmp/RtmpXdH5Gq/file160b625f817717 Exporting study "vignetteExample" as an R package Note: No maintainer email was specified. Using the placeholder: Unknown <unknown@unknown> Calculating pairwise overlaps. This may take a while... Exported study to /tmp/RtmpXdH5Gq/ONstudyvignetteExample Success! Returning "default" features for modelID "modelThatDoesntExistYet" --- finished re-building ‘OmicNavigatorUsersGuide.Rnw’ SUMMARY: processing the following file failed: ‘OmicNavigatorAPI.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package workflowr

Current CRAN status: ERROR: 1, OK: 12

Version: 1.7.2
Check: package dependencies
Result: ERROR Packages required but not available: 'knitr', 'rmarkdown', 'yaml' VignetteBuilder package required for checking but not installed: ‘knitr’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

CRAN Package Check Results for Maintainer ‘John Blischak <jdblischak at gmail.com>’

Package faviconPlease

Package OmicNavigator

Package workflowr