Last updated on 2025-12-07 07:50:29 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| climateStability | 1 | 1 | 11 | |
| occCite | 1 | 12 | ||
| spocc | 1 | 5 | 7 | |
| voluModel | 1 | 1 | 11 |
Current CRAN status: WARN: 1, NOTE: 1, OK: 11
Version: 0.1.4
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Hannah Owens <hannah.owens@gmail.com>’
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.4
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'rmarkdown', 'knitr', 'covr'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.4
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, OK: 12
Version: 0.6.1
Check: package dependencies
Result: ERROR
Package required but not available: ‘leaflet’
Packages suggested but not available for checking:
'covr', 'knitr', 'rmarkdown', 'taxize', 'waffle'
VignetteBuilder packages required for checking but not installed:
'knitr', 'rmarkdown'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, NOTE: 5, OK: 7
Version: 1.2.3
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
as.idigbio.Rd: idig_search_records
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 1.2.3
Check: package dependencies
Result: ERROR
Package required but not available: ‘ridigbio’
Packages suggested but not available for checking: 'taxize', 'vcr'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, WARN: 1, OK: 11
Version: 0.2.3
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'knitr', 'covr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.3
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.3
Check: examples
Result: ERROR
Running examples in 'voluModel-Ex.R' failed
The error most likely occurred in:
> ### Name: diversityStack
> ### Title: Diversity stack
> ### Aliases: diversityStack
> ### Keywords: plotting
>
> ### ** Examples
>
> library(terra)
terra 1.8.86
> rast1 <- rast(ncol=10, nrow=10)
> values(rast1) <- rep(0:1, 50)
>
> rast2 <- rast(ncol=10, nrow=10)
> values(rast2) <- c(rep(0, 50), rep(1,50))
>
> rastList <- list(rast1, rast2)
> result <- diversityStack(rasterList = rastList,
+ template = rast2)
Warning: PROJ: proj_create: no database context specified (GDAL error 1)
Warning: PROJ: proj_create: no database context specified (GDAL error 1)
Warning: PROJ: proj_create: no database context specified (GDAL error 1)
Flavor: r-oldrel-windows-x86_64
Version: 0.2.3
Check: tests
Result: ERROR
Running 'testthat.R' [24s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(voluModel)
>
> test_check("voluModel")
terra 1.8.86
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
Could not parse
spam, eggs, NA
into x and/or y coordinates.
Using longitude and latitude
as x and y coordinates, respectively.
Could not parse
spam, eggs, cheese
into x and/or y coordinates.
Using longitude, latitude, and depth
as x, y, and z coordinates, respectively.
Input SpatRaster vector names inappropriate:
a, b, c
Names must follow the format 'X' followed by a number corresponding to the starting depth of the layer.
Could not parse
into x and/or y coordinates.
Could not parse
into x and/or y coordinates.
Could not parse
cheese, eggs, NA
into x and/or y coordinates.
Could not parse
longitude, longitude, NA
into x and/or y coordinates.
Could not parse
latitude, latitude, NA
into x and/or y coordinates.
Could not parse
yak, yak, yak
into x and/or y coordinates.
Could not parse
xebu, xebu, xebu
into x and/or y coordinates.
Could not parse
xebu, xebu, xebu
into x and/or y coordinates.
Could not parse
xebu, xebu, xebu
into x and/or y coordinates.
Could not parse
xebu, xebu, xebu
into x and/or y coordinates.
Could not parse
cheese, eggs, spam
into x and/or y coordinates.
Could not parse
longitude, longitude, depth
into x and/or y coordinates.
Could not parse
latitude, latitude, depth
into x and/or y coordinates.
Could not parse
longitude, depth, depth
into x and/or y coordinates.
Could not parse
y, yum, X
into x, y, and/or z coordinates.
Could not parse
x, exlax, depth
into x and/or y coordinates.
Could not parse
z, z, sneeze
into x and/or y coordinates.
Could not parse
z, z, sneeze
into x and/or y coordinates.
Argument 'verbose' is not of type 'logical'.
Could not parse
spam, eggs
into x and/or y coordinates.
Using longitude and latitude
as x and y coordinates, respectively.
Using longitude and latitude
as x and y coordinates, respectively.
Loading required package: spam
Spam version 2.11-1 (2025-01-20) is loaded.
Type 'help( Spam)' or 'demo( spam)' for a short introduction
and overview of this package.
Help for individual functions is also obtained by adding the
suffix '.spam' to the function name, e.g. 'help( chol.spam)'.
Attaching package: 'spam'
The following objects are masked from 'package:base':
backsolve, forwardsolve
Loading required package: viridisLite
Loading required package: RColorBrewer
Try help(fields) to get started.
Attaching package: 'fields'
The following object is masked from 'package:terra':
describe
The following object is masked from 'package:testthat':
describe
Could not parse
eggs, spam, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
into x and/or y coordinates.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Argument 'clipToOcean' is not of type 'logical'.
Attaching package: 'dplyr'
The following objects are masked from 'package:terra':
intersect, union
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Using longitude, latitude, and depth
as x, y, and z coordinates, respectively.
Using longitude, latitude, and depth
as x, y, and z coordinates, respectively.
Could not parse
scientificName, decimalLongitude
into x and/or y coordinates.
Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Argument 'verbose' is not of type 'logical'.
Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Could not parse
scientificName, decimalLongitude
into x and/or y coordinates.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Could not parse
scientificName, decimalLongitude
into x and/or y coordinates.
Argument 'verbose' is not of type 'logical'.
First set of occurrences: Using decimalLongitude and y
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
First set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
Second set of occurrences: Using decimalLongitude and decimalLatitude
as x and y coordinates, respectively.
'rast2' was null. Replaced with blank raster.
'rast1' was null. Replaced with blank raster.
Both 'rast1' and 'rast2' were null.
They were replaced with blank rasters.
'rast2' was null. Replaced with blank raster.
'rast1' was null. Replaced with blank raster.
Both 'rast1' and 'rast2' were null.
They were replaced with blank rasters.
Flavor: r-oldrel-windows-x86_64