Last updated on 2026-11-09 01:52:17 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.0 | 11.50 | 64.82 | 76.32 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.0 | 8.18 | 48.25 | 56.43 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.0 | 9.00 | 43.39 | 52.39 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.3.0 | 47.09 | OK | |||
| r-devel-windows-x86_64 | 0.3.0 | 14.00 | 89.00 | 103.00 | OK | |
| r-patched-linux-x86_64 | 0.3.0 | OK | ||||
| r-release-linux-x86_64 | 0.3.0 | 11.40 | 58.89 | 70.29 | OK | |
| r-release-macos-arm64 | 0.3.0 | 3.00 | 29.00 | 32.00 | OK | |
| r-release-macos-x86_64 | 0.3.0 | 8.00 | 192.00 | 200.00 | OK | |
| r-release-windows-x86_64 | 0.3.0 | 14.00 | 87.00 | 101.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.0 | 3.00 | 37.00 | 40.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.0 | 8.00 | 161.00 | 169.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.0 | 17.00 | 98.00 | 115.00 | OK |
Version: 0.3.0
Check: examples
Result: WARN
Found the following significant warnings:
Warning in zarr::auto_chunk(d) : 'zarr::auto_chunk' is deprecated.
Deprecated functions may be defunct as soon as of the next release of
R.
See ?Deprecated.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(geozarr)
Loading required package: zarr
>
> test_check("geozarr")
Saving _problems/test-api-235.R
Saving _problems/test-api-279.R
Saving _problems/test-api-342.R
Saving _problems/test-create_geozarr_array-113.R
Saving _problems/test-create_geozarr_array-124.R
Saving _problems/test-create_geozarr_array-132.R
Saving _problems/test-create_geozarr_array-140.R
Saving _problems/test-create_geozarr_array-149.R
Saving _problems/test-geozarr_array-171.R
Saving _problems/test-set_convention-48.R
[ FAIL 10 | WARN 40 | SKIP 0 | PASS 741 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-api.R:235:3'): cs-irregular-memory ─────────────────────────────
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::as_geozarr(x = arr, name = "abc") at test-api.R:235:3
2. └─geozarr:::.create_gza(ab$metadata(), cs, x, name, location, registration = registration)
3. └─gza$write_external_coordinates()
4. └─private$write_or_verify_external(...)
── Error ('test-api.R:279:3'): cs-irregular-filesystem ─────────────────────────
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::as_geozarr(x = arr, name = "abc", location = fn) at test-api.R:279:3
2. └─geozarr:::.create_gza(ab$metadata(), cs, x, name, location, registration = registration)
3. └─gza$write_external_coordinates()
4. └─private$write_or_verify_external(...)
── Error ('test-api.R:342:3'): as_geozarr() with irregular numeric and unknown-named axes ──
Error: Single-array Zarr store cannot have external coordinate arrays
Backtrace:
▆
1. └─geozarr::as_geozarr(a) at test-api.R:342:3
2. └─geozarr:::.create_gza(ab$metadata(), cs, x, name, location, registration = registration)
3. └─gza$write_external_coordinates()
── Error ('test-create_geozarr_array.R:111:3'): create_geozarr_array() writes external coordinates and bounds ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array(...) at test-create_geozarr_array.R:111:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Error ('test-create_geozarr_array.R:123:3'): create_geozarr_array() writes externals into another group ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array(...) at test-create_geozarr_array.R:123:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Error ('test-create_geozarr_array.R:132:3'): create_geozarr_array() shares compatible external coordinates ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array("a", s$grp, axes, "float64") at test-create_geozarr_array.R:132:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Error ('test-create_geozarr_array.R:140:3'): create_geozarr_array() refuses incompatible external coordinates ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array(...) at test-create_geozarr_array.R:140:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Error ('test-create_geozarr_array.R:149:3'): create_geozarr_array() puts units and dimension names on the external array ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array(...) at test-create_geozarr_array.R:149:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Error ('test-geozarr_array.R:170:3'): cs store with external coordinates and bounds is re-opened ──
Error in `private$write_or_verify_external(grp, ext_name, values, crds$unit, ext_name)`: attempt to apply non-function
Backtrace:
▆
1. └─geozarr::create_geozarr_array(...) at test-geozarr_array.R:170:3
2. └─gza$write_external_coordinates()
3. └─private$write_or_verify_external(...)
── Failure ('test-set_convention.R:48:3'): set_convention() falls back to cs when spatial does not apply ──
Expected `conv_names(set_convention(list(), make_cs(irrx, regyd())))` to be identical to "cs".
Differences:
`actual`: "cs" "ref"
`expected`: "cs"
[ FAIL 10 | WARN 40 | SKIP 0 | PASS 741 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang