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CRAN Package Check Results for Package fishtree

CRAN Package Check Results for Package fishtree

Last updated on 2026-09-09 05:51:24 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.4 2.17 38.06 40.23 OK
r-devel-linux-x86_64-debian-gcc 0.3.4 1.81 30.46 32.27 OK
r-devel-linux-x86_64-fedora-clang 0.3.4 29.36 ERROR
r-devel-linux-x86_64-fedora-gcc 0.3.4 32.41 OK
r-devel-windows-x86_64 0.3.4 5.00 61.00 66.00 OK
r-patched-linux-x86_64 0.3.4 2.25 34.11 36.36 OK
r-release-linux-x86_64 0.3.4 2.03 34.28 36.31 OK
r-release-macos-arm64 0.3.4 1.00 17.00 18.00 OK
r-release-macos-x86_64 0.3.4 2.00 55.00 57.00 OK
r-release-windows-x86_64 0.3.4 4.00 56.00 60.00 OK
r-oldrel-macos-arm64 0.3.4 OK
r-oldrel-macos-x86_64 0.3.4 2.00 58.00 60.00 OK
r-oldrel-windows-x86_64 0.3.4 5.00 65.00 70.00 OK

Check Details

Version: 0.3.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘community-analysis.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘community-analysis.Rmd’ --- re-building ‘comparative-analysis.Rmd’ using rmarkdown Quitting from comparative-analysis.Rmd:40-48 [fishbase] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ there is no package called 'rfishbase' ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Quitting from comparative-analysis.Rmd:40-48 [fishbase] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ library(p, character.only = TRUE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Quitting from comparative-analysis.Rmd:40-48 [fishbase] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rfishbase ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Quitting from comparative-analysis.Rmd:40-48 [fishbase] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /tmp/Rtmp2pgPNt/RLIBS_13e39369589621 , /data/localhost/ripley/R/R-clang/library ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'comparative-analysis.Rmd' failed with diagnostics: there is no package called 'rfishbase' --- failed re-building ‘comparative-analysis.Rmd’ SUMMARY: processing the following file failed: ‘comparative-analysis.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

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