Last updated on 2025-12-07 07:49:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 9.86 | 107.39 | 117.25 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 6.29 | 50.54 | 56.83 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 20.00 | 154.90 | 174.90 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 20.00 | 151.66 | 171.66 | OK | |
| r-devel-windows-x86_64 | 1.1.3 | 14.00 | 175.00 | 189.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 10.65 | 93.41 | 104.06 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 9.63 | 95.02 | 104.65 | OK | |
| r-release-macos-arm64 | 1.1.3 | OK | ||||
| r-release-macos-x86_64 | 1.1.3 | 13.00 | 167.00 | 180.00 | OK | |
| r-release-windows-x86_64 | 1.1.3 | 16.00 | 171.00 | 187.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.3 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.3 | 8.00 | 163.00 | 171.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.3 | 19.00 | 201.00 | 220.00 | OK |
Version: 1.1.3
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'countcolors', 'devtools', 'DT', 'htmlTable', 'kableExtra', 'knitr',
'prettydoc', 'rmarkdown', 'rmdformats'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/40s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ctxR)
ℹ CCTE's Terms of Service: <https://www.epa.gov/comptox-tools/computational-toxicology-and-exposure-apis>
ℹ Please cite ctxR if you use it! Use `citation('ctxR')` for details.
No config file or environment variable found: API access unlikely.
>
> test_check("ctxR")
Using request.R from "ctxR"
[1] "Found 0 results. Try adjusting the search parameters."
[1] "Found 0 results. Try adjusting the search parameters."
[1] "Found 0 results. Try adjusting the search parameters."
[1] "Found 0 results. Try adjusting the search parameters."
Saving _problems/test-chemical-APIs-batch-133.R
DTXCID30182
Please input a correct value for `Projection`!
[1] "Found 0 results. Try adjusting the search parameters."
[1] "Found 0 results. Try adjusting the search parameters."
Saving _problems/test-chemical-APIs-batch-296.R
[1] "Found 0 results. Try adjusting the search parameters."
[1] "Found 0 results. Try adjusting the search parameters."
Saving _problems/test-chemical-APIs-188.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 504 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-chemical-APIs-batch.R:133:3'): Rate limit warnings ─────────────
Error in `get_chemical_image_batch(DTXSID = c("DTXSID7020182"), API_key = ctx_key(), rate_limit = "0")`: Please install png package
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-chemical-APIs-batch.R:133:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─ctxR::get_chemical_image_batch(...)
── Error ('test-chemical-APIs-batch.R:296:3'): Return data types ───────────────
Error in `get_chemical_image_batch(DTXSID = c("DTXSID7020182"), API_key = ctx_key())`: Please install png package
Backtrace:
▆
1. ├─testthat::expect_type(...) at test-chemical-APIs-batch.R:296:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─ctxR::get_chemical_image_batch(DTXSID = c("DTXSID7020182"), API_key = ctx_key())
── Error ('test-chemical-APIs.R:188:3'): Return data type ──────────────────────
Error: Please install png package
Backtrace:
▆
1. ├─testthat::expect_type(...) at test-chemical-APIs.R:188:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─ctxR::get_chemical_image(DTXSID = "DTXSID7020182", API_key = ctx_key())
5. └─httr::content(response, encoding = "UTF-8")
6. └─httr:::parse_auto(raw, type, encoding, ...)
7. └─httr (local) parser(x = content, type = type, encoding = encoding, ...)
8. └─httr:::need_package("png")
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 504 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.3
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc