CRAN Package Check Results for Package clim4health

Last updated on 2026-07-01 06:02:01 CEST.

Check Details

Version: 0.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [54s/54s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(clim4health) > > test_check("clim4health") Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE terra 1.9.34 Attaching package: 'terra' The following objects are masked from 'package:testthat': compare, describe The 'exp' s2dv_cube object has been aggregated to regions and has an 'area' dimension. Only bias adjustment or calibration will be applied, no spatial downscaling. Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. Note: If using 'Intlr' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc" [1] "Loaded 4-2025: took 0.00370311737060547" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201004.nc" [1] "Loaded 4-2010: took 0.0042269229888916" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201004.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201104.nc" [1] "Loaded 4-2011: took 0.00368809700012207" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201104.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201204.nc" [1] "Loaded 4-2012: took 0.00389504432678223" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.6/clim4health.Rcheck/tests/testthat/hindcast_201204.nc" - test-dataset-1 - test-dataset-2 Available climate datasets: - product_type - variable Required parameters: Variables found in 'path' are: 't2m'. Requested variables are: 'invalid_var'. Requested variable 'invalid_var' not found in 'path'. Skipping. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. Aggregating ensemble members with the function: mean Spherical geometry (s2) switched off Coordinate system already present. i Adding new coordinate system, which will replace the existing one. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. The provided areas are not in WGS84 (EPSG: 4326). They will be transformed into that CRS to perfom the spatial aggregation 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. 'crs' is not provided. Taking CRS from the input data if available. Time zone in the input data is empty. Assuming system timezone: America/New_York Time zone in the input data is empty. Assuming system timezone: America/New_York Saving _problems/test-c4h_time-91.R Time zone in the input data is empty. Assuming system timezone: America/New_York Saving _problems/test-c4h_time-101.R Requested variable 'dummy' not found in 'path'. Skipping. [ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ] ══ Skipped tests (8) ═══════════════════════════════════════════════════════════ • On CRAN (8): 'test-c4h_downscale.R:255:3', 'test-c4h_downscale.R:277:3', 'test-c4h_downscale.R:300:3', 'test-c4h_downscale.R:311:3', 'test-c4h_downscale.R:347:3', 'test-c4h_downscale.R:384:3', 'test-utils-load.R:654:3', 'test-utils-load.R:792:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-c4h_time.R:54:3'): Time examples run without problems ──────── Expected `{ ... }` not to throw any errors. Actually got a <expectation_failure> with message: Expected `dim(stat_month$data)[["sdate"]]` to equal 3. Differences: `actual`: 6.0 `expected`: 3.0 ── Failure ('test-c4h_time.R:101:3'): Time examples run without problems ─────── Expected `dim(stat_daily$data)[["time"]]` to equal 1116. Differences: `actual`: 1147.0 `expected`: 1116.0 [ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [56s/59s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(clim4health) > > test_check("clim4health") Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE terra 1.9.34 Attaching package: 'terra' The following objects are masked from 'package:testthat': compare, describe The 'exp' s2dv_cube object has been aggregated to regions and has an 'area' dimension. Only bias adjustment or calibration will be applied, no spatial downscaling. Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. Note: If using 'Intbc' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. Note: If using 'Intlr' and 'points' is not specified, downscaling is to a grid. 'target_grid' has not been specified. Downscaling will be done to the grid of 'obs'. [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc" [1] "Loaded 4-2025: took 0.00385785102844238" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/ERA5.land..April.data_2025_04_202504.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201004.nc" [1] "Loaded 4-2010: took 0.00378108024597168" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201004.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201104.nc" [1] "Loaded 4-2011: took 0.00378298759460449" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201104.nc" [1] "Loading data to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201204.nc" [1] "Loaded 4-2012: took 0.00377583503723145" [1] "File saved to: /Volumes/Builds/packages/big-sur-x86_64/results/4.5/clim4health.Rcheck/tests/testthat/hindcast_201204.nc" - test-dataset-1 - test-dataset-2 Available climate datasets: - product_type - variable Required parameters: Variables found in 'path' are: 't2m'. Requested variables are: 'invalid_var'. Requested variable 'invalid_var' not found in 'path'. Skipping. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. Aggregating ensemble members with the function: mean Spherical geometry (s2) switched off Coordinate system already present. i Adding new coordinate system, which will replace the existing one. Variables found in 'path' are: 't2m'. Requested variables are: 't2m'. The provided areas are not in WGS84 (EPSG: 4326). They will be transformed into that CRS to perfom the spatial aggregation 'crs' is not provided. Assuming WGS 84 (EPSG:4326) for gridded data. 'crs' is not provided. Taking CRS from the input data if available. Time zone in the input data is empty. Assuming system timezone: America/New_York Time zone in the input data is empty. Assuming system timezone: America/New_York Saving _problems/test-c4h_time-91.R Time zone in the input data is empty. Assuming system timezone: America/New_York Saving _problems/test-c4h_time-101.R Requested variable 'dummy' not found in 'path'. Skipping. [ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ] ══ Skipped tests (8) ═══════════════════════════════════════════════════════════ • On CRAN (8): 'test-c4h_downscale.R:255:3', 'test-c4h_downscale.R:277:3', 'test-c4h_downscale.R:300:3', 'test-c4h_downscale.R:311:3', 'test-c4h_downscale.R:347:3', 'test-c4h_downscale.R:384:3', 'test-utils-load.R:654:3', 'test-utils-load.R:792:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-c4h_time.R:54:3'): Time examples run without problems ──────── Expected `{ ... }` not to throw any errors. Actually got a <expectation_failure> with message: Expected `dim(stat_month$data)[["sdate"]]` to equal 3. Differences: `actual`: 6.0 `expected`: 3.0 ── Failure ('test-c4h_time.R:101:3'): Time examples run without problems ─────── Expected `dim(stat_daily$data)[["time"]]` to equal 1116. Differences: `actual`: 1147.0 `expected`: 1116.0 [ FAIL 2 | WARN 37 | SKIP 8 | PASS 543 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-macos-x86_64