Last updated on 2026-10-24 01:51:58 CEST.
| Package | OK | NOTE | ERROR |
|---|---|---|---|
| afthd | 12 | 1 | |
| designsize | 13 | ||
| dscoreMSM | 13 | ||
| flassomsm | 13 | ||
| highMLR | 12 | 1 | |
| ILRCM | 13 | ||
| JMbdirect | 6 | 7 | |
| jmBIG | 6 | 7 | |
| jmSurface | 13 | ||
| longit | 11 | 2 | |
| MIGEE | 13 | ||
| MIIPW | 13 | ||
| modMStates | 13 | ||
| QoLMiss | 11 | 2 | |
| SurvHiDim | 11 | 2 | |
| SurviMChd | 13 |
Current CRAN status: OK: 12, ERROR: 1
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘afthd-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: pvaft
> ### Title: Estimates of univariate covariates using Accelerated Failure
> ### time (AFT) model without MCMC.
> ### Aliases: pvaft
>
> ### ** Examples
>
> ##
> data(hdata)
> pvaft(9,30,STime="os",Event="death",0.1,hdata)
Error in a$specials[[i]] : subscript out of bounds
Calls: pvaft ... survfit.coxph -> model.matrix.coxph -> delete.response -> off
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 12, ERROR: 1
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(highMLR)
>
> test_check("highMLR")
Using manual stability selection (stabs unavailable for this fit).
Fitting method: coxnet
Fitting method: univariate
Saving _problems/test-v03-42.R
[ FAIL 1 | WARN 75 | SKIP 5 | PASS 15 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test-methods.R:29:3', 'test-methods.R:39:3',
'test-methods.R:48:3', 'test-v03.R:26:3', 'test-v03.R:56:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-v03.R:41:3'): pseudo method with glmnet runs ───────────────────
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. └─highMLR::highmlr(...) at test-v03.R:41:3
2. └─highMLR:::fit_pseudo(...)
3. └─prodlim::prodlim(...)
4. └─prodlim::EventHistory.frame(...)
5. └─prodlim::model.design(...)
6. └─stats::delete.response(terms)
7. └─stats (local) off(a$specials[[i]])
[ FAIL 1 | WARN 75 | SKIP 5 | PASS 15 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13
Current CRAN status: OK: 6, ERROR: 7
Version: 0.1.1
Check: package dependencies
Result: ERROR
Package required but not available: 'jmBIG'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64
Version: 0.1.1
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavors: r-release-windows-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 6, ERROR: 7
Version: 0.1.3
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 11, NOTE: 2
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from:
‘utils’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 13
Version: 0.1.0
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘flexImputeModel.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 11, NOTE: 2
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from:
‘missMethods’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 11, NOTE: 2
Version: 0.1.1
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from:
‘readr’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13