Last updated on 2026-11-09 01:52:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.1 | 6.40 | 341.14 | 347.54 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.1 | 4.68 | 43.70 | 48.38 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.0.1 | OK | ||||
| r-devel-linux-x86_64-fedora-gcc | 2.0.1 | 202.65 | OK | |||
| r-devel-windows-x86_64 | 2.0.1 | 9.00 | 395.00 | 404.00 | OK | |
| r-patched-linux-x86_64 | 2.0.1 | OK | ||||
| r-release-linux-x86_64 | 2.0.1 | 5.98 | 270.82 | 276.80 | OK | |
| r-release-macos-arm64 | 2.0.1 | 2.00 | 136.00 | 138.00 | OK | |
| r-release-macos-x86_64 | 2.0.1 | 4.00 | 421.00 | 425.00 | OK | |
| r-release-windows-x86_64 | 2.0.1 | 10.00 | 378.00 | 388.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.1 | 1.00 | 128.00 | 129.00 | OK | |
| r-oldrel-macos-x86_64 | 2.0.1 | 4.00 | 399.00 | 403.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.1 | 12.00 | 430.00 | 442.00 | OK |
Version: 2.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [1s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> # Setting the CPU Thread limit to max 2 to meet CRAN guidelines.
> Sys.setenv("OMP_THREAD_LIMIT" = 2)
>
> library(testthat)
> library(APCalign)
>
> test_check("APCalign")
Error in `source_dir()`:
! Failed to evaluate './helper.R'.
Caused by error in `parquet___arrow___ArrowReaderProperties__Make()`:
! Cannot call parquet___arrow___ArrowReaderProperties__Make(). See https://arrow.apache.org/docs/r/articles/install.html for help installing Arrow C++ libraries.
Backtrace:
▆
1. ├─testthat::test_check("APCalign")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_helpers(".", env)
7. │ └─testthat::source_dir(path, "^helper.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─APCalign::load_taxonomic_resources(...) at ./helper.R:1:1
15. │ └─APCalign:::dataset_access_function(...)
16. │ └─APCalign:::dataset_get(version, path)
17. │ └─arrow::read_parquet(path_to_apc)
18. │ ├─ParquetFileReader$create(file, props = props, mmap = mmap, ...)
19. │ │ └─arrow:::assert_is(props, "ParquetArrowReaderProperties")
20. │ │ ├─assertthat::assert_that(inherits(object, class), msg = msg)
21. │ │ │ └─assertthat::see_if(..., env = env, msg = msg)
22. │ │ │ ├─base::tryCatch(...)
23. │ │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
24. │ │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
25. │ │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
26. │ │ │ └─base::eval(assertion, env)
27. │ │ │ └─base::eval(assertion, env)
28. │ │ └─base::inherits(object, class)
29. │ └─ParquetArrowReaderProperties$create()
30. │ └─arrow:::parquet___arrow___ArrowReaderProperties__Make(isTRUE(use_threads))
31. └─base::.handleSimpleError(...)
32. └─testthat (local) h(simpleError(msg, call))
33. └─cli::cli_abort(...)
34. └─rlang::abort(...)
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc