80b96aac00d72702dabb2b35152e750a *DESCRIPTION
00d2bf36ff10681529dbc6bfc58819e8 *NAMESPACE
751b10c06858219e3544d965fe68bf20 *NEWS.md
9bc12681a47b49ceb74e459b5c96c7a4 *R/RcppExports.R
0f704a6b8891eed9f13a711c79e8849e *R/data.R
87944c4a592661a684962abf6dc25fc5 *R/differential_fdr.R
fa734f97c17bde14c66204e737d0b91f *R/group_fdr.R
b0a8b318bf592fbe7fb612445d60b19d *R/pairwise_matching.R
51967207f4808237145a736c6fb4cf81 *R/plot_all_networks.R
6ce36d642dec64e3ed4bbf71b60689cc *R/qf_smd.R
08a2a81d582e6b0d25a137e20f221680 *R/run_scNPM.R
3d163b3a0321ccd03e51b0883e2eedc9 *R/sampler_progress.R
4dbb2459d6c186a3b641d2ba30bf2774 *R/zzz.R
13479fe633e3984c36189feb9b96fd04 *README.md
9f35f05132a738484c51d9e7663185af *data/top50_goal_gene_mt.RData
34e8a574d7270a392dd2216cff5d9374 *inst/algorithm.md
2b25b0a4e486840faabd836bba8054d4 *inst/examples/amd_workflow.R
1e1ef153a32a0304f42ffef105e80fce *inst/extdata/top50_string_interactions_short.tsv
8dc70b2060bfb1e87b33842b5d1f70bc *man/cell.Rd
bbbf589b98c8e39a7269663f5129de2f *man/cols_to_MR.Rd
6afea401489e05e4dc679bbe523faa18 *man/cols_to_PR.Rd
2260db7f7da12564b2d781e368781420 *man/compute_qf_smd.Rd
69100d048d8230c0bbab114fd220bbf4 *man/goal_gene.Rd
29352bb1f4b5a5b4226c6b81918cffde *man/goal_gene_mt.Rd
59b4528dae2eee9b4d65c4dc8f6895e1 *man/mt.Rd
2d2ecf6336931064f7620b4e147d77fb *man/plot_diff_network.Rd
0e9b35656326b608114d3a787c8d6129 *man/plot_group_network.Rd
7a95b6f6604aaefe453dbe7b5aeb8514 *man/plot_network_core.Rd
02823dd079b423464726176ce355dd3b *man/run_scNPM.Rd
ef0aacaa749fd3e425ace5dabbbb5c96 *man/scNPM-package.Rd
3d52bee5223080f153fac47c57611849 *man/select_differential_edges.Rd
3841cb90d44992c9551a0037f689ea41 *man/select_group_edges.Rd
740717d8353c82a2034902bc24fdd573 *src/Makevars
45188a467fc31f1d497c141d9f01017d *src/Makevars.win
c92138554f15cc1d51a4e09b2f45948c *src/RcppExports.cpp
573eeb86050102bcf6ac4a8b4ddc1edb *src/freeze_consensus.h
adff68d6ee96b39fa07cac11c06b889c *src/function_real.cpp
8f1b06e0b2bab61a27f9d768531b5c22 *src/global_matching.h
a70f5e417bfe81daeb96fec9c89a901d *src/paired_prior.h
9803b0c8b5bcd3960ae540866dc1f00c *src/scNPM-win.def
1fc74ae505b7c1d478b3bd39edfa13f6 *src/scNPM_types.h
0ce77b861819052ab1fae5f7c0563e5e *src/staged_inference.h
60cb0961808ff2a2a19e84a9e8b9eaf7 *tests/testthat.R
4d6b0ebadf41a8a32c7c809874336400 *tests/testthat/helper-threads.R
913e0f57ad3e62201c43b8bbc75b6f71 *tests/testthat/test-console-output.R
46a63d66860b60a8ecd442b8ce3b5f9d *tests/testthat/test-global-threshold.R
6e76ec646aa77fc2e36e86bf0d28b6a3 *tests/testthat/test-group-bfdr.R
79d80272962b7c6b1c8ec457459bd1b7 *tests/testthat/test-model-regressions.R
17bd0eeb3855e386a4fbeaca6df15f59 *tests/testthat/test-paired-prior.R
a6bd7d2939344910f84cf8c75e9d52f0 *tests/testthat/test-pairwise-freeze-progress.R
5b29b788283fe67b15d6d5366ef92a1b *tests/testthat/test-pairwise-solver-fallback.R
655d5c302c30efbbc6202efddf129aa0 *tests/testthat/test-plot_scNPM.R
3c0ab03f57c0e1c71b246582a1d4650c *tests/testthat/test-reference-covariates.R
43d813d05bb4a7c8c4bd8f389df1b7ff *tests/testthat/test-run_scNPM.R
028ea9e768f559bee0cfecd0793449a7 *tests/testthat/test-staged-fdr.R
