76545596857bb51080fff2c73f81bd03 *DESCRIPTION
9dd72ecf85eb52e2f6188db90b7f2321 *NAMESPACE
a1bb98dec62dfebd4c4765b7e47a6ce0 *R/DEGeneExpr.R
01b7abe88c0319575784ff16f69f85fb *R/DEGeneExpr.default.R
a321403cb7a57062d01460da32b51455 *R/FactorNetworks.R
f9ea04aa077507c31f0694f6143bd498 *R/FactorNetworks.default.R
1e4049213cbda00803efd82df69634c7 *R/FilterEdges.FactorNetworks.R
9af5ec10ff931029ed5c06ea002e4720 *R/FilterEdges.R
f8e0bd1c506f9683caec5373a582f0f1 *R/FilterEdges.SIMoNeNet.R
9feabcfd41ef8a28a975687351e594c8 *R/FilterEdges.ShortPathSTRINGNet.R
c532ba6afad87c6a558d408fd223d4c8 *R/MultiDEGeneExpr.R
971ad08a4d4d0d2ab90c99abe1761b5d *R/MultiDEGeneExpr.default.R
a8bf7848bcfcdf562ec7379e64eed42e *R/MultiNetworks.R
21e6e9d08a6473b6a327830ca7f05250 *R/MultiNetworks.default.R
f4a101b71868f8aede9664317a51d1f1 *R/SIMoNeNet.R
0ad868166c1f67b87a2f060d6fbc37c9 *R/SIMoNeNet.default.R
de4c9da71ef4a2b2f7f6a216351562bf *R/STRINGNet.R
04aae82247e78a695aee694e3e126b4a *R/STRINGNet.default.R
8147035801dff5bd120087f8eaeef578 *R/ShortPathSTRINGNet.R
1d683b047bc1c876a26f839973e4da13 *R/ShortPathSTRINGNet.default.R
bd1f7ae101bfdd74ec23e657f9edc126 *R/WGCNANet.R
b9bce384a12f18eb4dc5757e7d1af6f7 *R/WGCNANet.default.R
f509f6b402d92fa1a2572d8c4145ccd1 *R/addFactorGraphsToCytoscape.R
cac0604e81f024555e0369e899eaab8c *R/addGraphToCytoscape.R
6f10a6224cdd52be430a57fe892a87bc *R/addMultiGraphToCytoscape.R
7f8393b48168f0a687ab3ff95680a712 *R/addNetworkStyle.R
1522c93a5c17cdea255a71a21addf9b0 *R/addSIMoNeNetMappings.R
785697258d6298187263065c6f302886 *R/addSTRINGNetMappings.R
7d5ed2c81c3005e9072d8231639876b2 *R/addShortPathSTRINGNetMappings.R
782cc16c311933a6a259f6d459f593c7 *R/addSkeletonDefaults.R
90ac5597621d96d3f57f03997bae50ca *R/addSkeletonMappings.R
6ad51f4febdf38ffbfef25f621487a0c *R/addWGCNANetMappings.R
8dbbc2149ecacbdec0592dc6cb2c979a *R/applyLayout.R
140648bf2d384aab001c6affd6eacf2b *R/applyStyle.R
8c2e6b196f4b4984354ac89ee9459293 *R/as.igraph.stringgaussnet.R
2835a350581b7c577a4ca10d79707c6f *R/checkCytoscapeRunning.R
5e0f84dac03e206cf322870759a057c3 *R/compareFactorNetworks.R
67eaeadbf6acc7629be17193378506b3 *R/compareGaussNetworks.R
0b18be91d5f3e8104ea4a644238986f5 *R/computeCombinedScores.R
9bb38829d953a946bf150aab95d80341 *R/computeSimilarities.R
e65504150c3e4b8f14278f21e3f69d10 *R/convertAliases.R
bef1c5428f653db94122ad5e8284b979 *R/convertToDistGraph.R
c4acb2bd912efafc9ccef9541232334d *R/export.R
5a82319458ad72be7403c389a175fb79 *R/export.SIMoNeNet.R
d10d4eb639871d1def8419fc4ec95dfc *R/export.STRINGNet.R
f1399e6082b355294784106620721ffd *R/export.ShortPathSTRINGNet.R
8ab7bb11c87b32ac98ad3bd734ec3d12 *R/export.WGCNANet.R
0213d7b74628909771fcad2d6a967b42 *R/findShortestPathways.R
d766f8a11a405103296ef5585fc345f1 *R/getGenesInformations.R
af7dbaa762237c0f256caec22d17f9ba *R/getMartDatasets.R
77cba101308728c0a06196bc2f2e888a *R/getSIMoNeNet.R
998ad12576452a2f41b0403d8b1d2e1b *R/getSTRINGNet.R
e1cce09b8ca9984b2c99d46008adb86c *R/getShortestPaths.R
ab984cb79f6d40f4898a148116bed867 *R/getWGCNANet.R
5bd4530d2b4d4e42cfac6200ab6ba2d2 *R/mapAttributes.R
aaaaca11ba839821e7c547be699956c5 *R/mergeFactorEdges.R
82e9a7a95e6d2e92725ed48e9f77e69b *R/mergeGaussEdges.R
fbd67e54d0bd8bda985c51372aade9c3 *R/pickSIMoNeParam.R
204c3f6773e2036b874d816e3c83a015 *R/pickWGCNAParam.R
044f83de558dbba138f70e0d838bfd3a *R/plot.FactorNetworks.R
760df1a03577a75215f7a3924d0a4982 *R/plot.SIMoNeNet.R
51b3586b12fae905d911cde23225005f *R/plot.WGCNANet.R
6e70cb2e36a7c044e2d5eed09451b962 *R/print.DEGeneExpr.R
d4f1f83ea62933612d74f6a6e8c8a1fa *R/print.FactorNetworks.R
0e45bda658f11c969baa4ec5d6ca6588 *R/print.MultiDEGeneExpr.R
bc5d7b51970c09b408e48a73a94e13bf *R/print.MultiNetworks.R
e5df66417db789880eaaee18c4f38fa2 *R/print.SIMoNeNet.R
25612bd5febad3ae6d360605fcf272d2 *R/print.STRINGNet.R
497d3e2c0dab676aa75fddaa23c08955 *R/print.ShortPathSTRINGNet.R
9e59e83f4dcde7cc07dfaa70865090d9 *R/print.WGCNANet.R
9f25967cfa33504ce19f91519330359e *R/resetCytoscapeSession.R
636fc8b9b8018cf06a23512fef9fabff *R/saveCytoscapeSession.R
d37fd74e6d4ee0652c6e9a8c5e858b49 *R/selectInteractionTypes.R
54c44ea18dd62522d4146b9ec9da928c *R/summary.SIMoNeNet.R
44b21fc405b76f1d5c75cbbe03c53c7a *R/summary.STRINGNet.R
194e88a71d802d5cc55410d865c19f66 *R/summary.ShortPathSTRINGNet.R
b5913014b7278d7f18bd1afd5a64194a *R/summary.WGCNANet.R
83df98f22050a938d6e47f6a79b7bea2 *R/toCytoscape.R
fe894fbb1ea8c62b1e40e0a138b867c8 *build/vignette.rds
d5296cb74eae91ad7104955bc06c6ea6 *data/SpADEGenes.rda
80c356507ff5f9b03a9e1d5fbfd2421c *data/SpADataExpression.rda
25b438a9ccbce78c26ac6699cb7b4d0d *data/SpASamples.rda
026338f6785a50e381fbfef8bc00cf1a *inst/doc/stringgaussnet.R
868fff4370f307a27ff4bb632ef2b189 *inst/doc/stringgaussnet.Rmd
b46aff4598f48dcf242a7747c3b60686 *inst/doc/stringgaussnet.pdf
6a55c7f02c95856924cea48ce096dcb0 *man/DEGeneExpr.Rd
cc252a2d82110f0ae1ef7b328f3dce80 *man/DEGeneExpr.default.Rd
4eab91bb16d49d97cbcc887add6a6c18 *man/FactorNetworks.Rd
bc86b01572138e2b9d31c22ac47ca89a *man/FactorNetworks.default.Rd
2e0940c5427efee7becd637560a41497 *man/FilterEdges.FactorNetworks.Rd
3eeb3f21d6bd964fac5150a228ff2ce0 *man/FilterEdges.Rd
c7f9c753e092ebddff8d855eebd90083 *man/FilterEdges.SIMoNeNet.Rd
c63c22b099fdc1acd4b839cd94dbc225 *man/FilterEdges.ShortPathSTRINGNet.Rd
0edd8bd29ac30f25129d08183fbda8c8 *man/MultiDEGeneExpr.Rd
135db989895d20f9f6bbc1acee6c980d *man/MultiDEGeneExpr.default.Rd
7ff9d243880473c6acd5866782dc394a *man/MultiNetworks.Rd
35aa4effe4acae42ea24c6946c5d68ce *man/MultiNetworks.default.Rd
9c328a76fdf61e629446c5d9b33ad4ef *man/SIMoNeNet.Rd
e66e4a0289f0a4d08ac34a4e4c585c0e *man/SIMoNeNet.default.Rd
c5679241a2ae6ed7468d377791681b4c *man/STRINGNet.Rd
2ae224f61b6054023f35a155712918ed *man/STRINGNet.default.Rd
b81a0afa6d9f26751150cb69a45975fd *man/ShortPathSTRINGNet.Rd
d81ccd22740f72d8a1977007e61a57b6 *man/ShortPathSTRINGNet.default.Rd
a07b686b08eba749976492444a7481cf *man/SpADEGenes.Rd
c93d407b68ccf426ab6440975ba95fe2 *man/SpADataExpression.Rd
e18c01cf8e46e70b8c82edbe110507eb *man/SpASamples.Rd
99cb4a2f5b1c28b0ff2d859c6ec7fa8c *man/WGCNANet.Rd
153a10eacae91976f033c205c8835f4a *man/WGCNANet.default.Rd
e8dc2ca8ae4c77cd08377fbf66d6194c *man/addFactorGraphsToCytoscape.Rd
4886f56af0fb6353b4bbf60bd41918c8 *man/addGraphToCytoscape.Rd
9c7cb219417a21c21852fedf88b6d6fe *man/addMultiGraphToCytoscape.Rd
cf88948aabd4420c74da703785090afc *man/addNetworkStyle.Rd
1d7b86d0f46c18f0dfd5939c480be210 *man/addSIMoNeNetMappings.Rd
13f47ce7892afb83bf5d8e479faadd1b *man/addSTRINGNetMappings.Rd
81110114856b83b3b1181dff6e59ee05 *man/addShortPathSTRINGNetMappings.Rd
99fafb14d50071d732876e63a5a84571 *man/addSkeletonDefaults.Rd
9eefaed51eb5373e0b01a8ae622388b6 *man/addSkeletonMappings.Rd
784ba9a7d36e4b09938d79ee8c7d5c6d *man/addWGCNANetMappings.Rd
72ecc860521b36ffa6101352548ee99b *man/applyLayout.Rd
ff9591db11dab29fd3152df311466c2c *man/applyStyle.Rd
517745a82c4d03ce5afab8266df9f00f *man/as.igraph.stringgaussnet.Rd
c0c303f2aec537c2e2663428d1a5e88f *man/checkCytoscapeRunning.Rd
c0e9d518439feba8b56144d7896c89b2 *man/compareFactorNetworks.Rd
bcd33a4bb8badd5cbf42eea2df37262b *man/compareGaussNetworks.Rd
d0ad36599b83b571f689dd626870f9f1 *man/computeCombinedScores.Rd
d8a5f782265b5a466fbae98b7a56fc82 *man/computeSimilarities.Rd
d7482673a63f0f11536d26cdf3b4a27c *man/convertAliases.Rd
aca9c6f1c714a092e26188c0490e59b0 *man/convertToDistGraph.Rd
91fdda05e0d7b2d805c97a33a3e108fa *man/export.Rd
60e009d8a5eeb16bc0d2007991ad9733 *man/export.SIMoNeNet.Rd
491b75d48757f3eca743e96549482985 *man/export.STRINGNet.Rd
87bd19036105e09c3d5eb34d9a42e700 *man/export.ShortPathSTRINGNet.Rd
53dfc24b9aa19b255a58803731abb0d9 *man/export.WGCNANet.Rd
e368eab490da6783e4b48a5b273fbb24 *man/findShortestPathways.Rd
aca4c0eba21e6c680e4eb2bb4bd43e76 *man/getGenesInformations.Rd
8321f842e5763abd4205d3542170d454 *man/getMartDatasets.Rd
597f3de7dc4449bad665dbad6a1550b9 *man/getSIMoNeNet.Rd
684cb8e36ebdc8bca99fd0931fe227c1 *man/getSTRINGNet.Rd
de4e5f078d59a5205ccf19e8c26e97d7 *man/getShortestPaths.Rd
10e1f7618570e3b7ce248068cff20e98 *man/getWGCNANet.Rd
589a19f348feb9927656a1865a19712f *man/mapAttributes.Rd
3c9132b6d7365fd4c846d15eac94e0f8 *man/mergeFactorEdges.Rd
e76d63cb46a049ddab21456d00df652d *man/mergeGaussEdges.Rd
7b52af3d464342490a4bad62b32ef98a *man/pickSIMoNeParam.Rd
3930f83feb8d35f5f12b477f7aa27f00 *man/pickWGCNAParam.Rd
591748b459ad12c5bdc3df1a1fc0d57c *man/plot.FactorNetworks.Rd
e3d35a94bd249f9ad71d2e262bef557d *man/plot.SIMoNeNet.Rd
1ac18c2431e1ec6c12bbef50471468ce *man/plot.WGCNANet.Rd
0afbd258ddb24b37e9a47953dae5afcc *man/print.DEGeneExpr.Rd
8f4dedfccbac17cbb5d9e5f5594c8c74 *man/print.FactorNetworks.Rd
e8020de9c20a9388e3a28dc71227df5e *man/print.MultiDEGeneExpr.Rd
53720d9b9187c46a22dd02328532f7ac *man/print.MultiNetworks.Rd
514f353b11ee0b7f3d39a1b70314a900 *man/print.SIMoNeNet.Rd
a2a367f7e2ae12b790cab5995a2003c4 *man/print.STRINGNet.Rd
276b57b7703f262d882b369a78e53558 *man/print.ShortPathSTRINGNet.Rd
25843c4ae2f62f2f2dc124e0a4abb280 *man/print.WGCNANet.Rd
f583c1b36c7b98a61e0a2282f0ba60f3 *man/resetCytoscapeSession.Rd
1ce9a8a6ab2a6830edca947516689f8e *man/saveCytoscapeSession.Rd
c85f109200314fe8894e602f275de5b7 *man/selectInteractionTypes.Rd
6e433ee7d533f509b09a6a44bce2c894 *man/stringgaussnet-package.Rd
8081e77c22c62a4157322d569d476810 *man/summary.SIMoNeNet.Rd
8bec4540271a90b0513506fce5b47902 *man/summary.STRINGNet.Rd
edb79878205172ff7feaf380828bbe99 *man/summary.ShortPathSTRINGNet.Rd
f83f698033419e88208b1c78004aa8e7 *man/summary.WGCNANet.Rd
4ffc95137cf9018077aed422df9aca84 *man/toCytoscape.Rd
4b52ba9d950e3c857a55b2343c4adec8 *vignettes/misc/Figure_CompareNetworks.png
ccdf222ea95fe9186324243cc5968f5d *vignettes/misc/Figure_FactorNetworks.png
eec9cd710c83e50e849da4693ab780ff *vignettes/misc/Figure_ShortPathNetworks.png
e18ec172b1cd9cb4ff89c0bc8856de86 *vignettes/misc/Figure_Vignette.png
8b11b209e6a6b2af928b51b6c976abc2 *vignettes/misc/Figure_pickWGCNA.png
73ec7c229ccac402171676e62ee0a4ad *vignettes/misc/bibliography.bib
868fff4370f307a27ff4bb632ef2b189 *vignettes/stringgaussnet.Rmd
