Package: stringgaussnet
Type: Package
Title: PPI and Gaussian Network Construction from Transcriptomic
        Analysis Results Integrating a Multilevel Factor
Version: 1.1
Date: 2015-07-22
Author: Emmanuel Chaplais, Henri-Jean Garchon
Maintainer: Emmanuel Chaplais <emmanuel.chaplais@inserm.fr>
Description: A toolbox for a construction of protein-protein interaction networks through the 'STRING' application programming interface, and an inference of Gaussian networks through 'SIMoNe' and 'WGCNA' approach, from DE genes analysis results and expression data. Additional functions are provided to import automatically networks into an active 'Cytoscape' session.
Imports:
        AnnotationDbi,GO.db,VennDiagram,simone,biomaRt,limma,pspearman,igraph,httr,RJSONIO,RCurl,org.Hs.eg.db,graphics,grDevices,stats,utils
License: GPL-3
Suggests: knitr
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-07-22 08:13:07 UTC; emmanuel
Repository: CRAN
Date/Publication: 2015-07-22 12:18:19
