# Generated by roxygen2: do not edit by hand

S3method(labelHaplotypes,character)
S3method(labelHaplotypes,default)
S3method(labelHaplotypes,gtypes)
S3method(labelHaplotypes,list)
S3method(plot,jack.influential)
export("setDescription<-")
export("setOther<-")
export("setSchemes<-")
export("setStrata<-")
export(Hstats)
export(LDgenepop)
export(TiTvRatio)
export(alleleFreqs)
export(alleleSplit)
export(allelicRichness)
export(arlequinRead)
export(arlequinWrite)
export(arp2gtypes)
export(as.multidna)
export(baseFreqs)
export(clumpp)
export(createConsensus)
export(df2gtypes)
export(dupGenotypes)
export(evanno)
export(expandHaplotypes)
export(expectedNumAlleles)
export(fixedDifferences)
export(fixedSites)
export(freq2GenData)
export(fscBlock_dna)
export(fscBlock_freq)
export(fscBlock_microsat)
export(fscBlock_snp)
export(fscBlock_standard)
export(fscCleanup)
export(fscDeme)
export(fscEstParam)
export(fscEvent)
export(fscReadArp)
export(fscReadParamEst)
export(fscReadSFS)
export(fscRun)
export(fscSettingsDef)
export(fscSettingsDemes)
export(fscSettingsEst)
export(fscSettingsEvents)
export(fscSettingsGenetics)
export(fscSettingsMigration)
export(fscTutorial)
export(fscWrite)
export(fstToNm)
export(fusFs)
export(gelato)
export(gelatoPlot)
export(genepop)
export(genepopWrite)
export(genind2gtypes)
export(getAlleleNames)
export(getDescription)
export(getIndNames)
export(getLociNames)
export(getNumStrata)
export(getOther)
export(getPloidy)
export(getSchemes)
export(getSequences)
export(getStrata)
export(getStrataNames)
export(gtypes2genind)
export(gtypes2loci)
export(gtypes2phyDat)
export(heterozygosity)
export(hweTest)
export(is.gtypes)
export(isTi)
export(isTv)
export(iupacCode)
export(iupacMat)
export(jackHWE)
export(jackInfluential)
export(labelHaplotypes)
export(landscape2df)
export(landscape2gtypes)
export(ldNe)
export(loci2gtypes)
export(lowFreqSubs)
export(mRatio)
export(maf)
export(mafft)
export(maverickRun)
export(mostDistantSequences)
export(mostRepresentativeSequences)
export(neiDa)
export(nucleotideDivergence)
export(nucleotideDiversity)
export(numAlleles)
export(numGenotyped)
export(numGensEq)
export(numMissing)
export(overallTest)
export(pairwiseTest)
export(permuteStrata)
export(phase)
export(phaseFilter)
export(phasePosterior)
export(phaseReadPair)
export(phaseReadSample)
export(phaseWrite)
export(phyDat2gtypes)
export(popStructTest)
export(privateAlleles)
export(propSharedLoci)
export(propUniqueAlleles)
export(read.arlequin)
export(read.fasta)
export(read.mega)
export(readGenData)
export(removeSequences)
export(sequence2gtypes)
export(sequenceLikelihoods)
export(sfs)
export(sharedAlleles)
export(simGammaHaps)
export(statChi2)
export(statFis)
export(statFst)
export(statFstPrime)
export(statGst)
export(statGstDblPrime)
export(statGstPrime)
export(statJostD)
export(statPhist)
export(strataSplit)
export(stratify)
export(structurePlot)
export(structureRead)
export(structureRun)
export(structureWrite)
export(subType)
export(summarizeAll)
export(summarizeInds)
export(summarizeLoci)
export(summarizeSeqs)
export(tajimasD)
export(theta)
export(trimNs)
export(validIupacCodes)
export(variableSites)
export(wrightFst)
export(write.arlequin)
export(write.fasta)
export(write.mega)
export(write.nexus.snapp)
export(writeGtypes)
exportClasses(gtypes)
exportMethods("[")
exportMethods("setDescription<-")
exportMethods("setOther<-")
exportMethods("setSchemes<-")
exportMethods("setStrata<-")
exportMethods(as.data.frame)
exportMethods(as.matrix)
exportMethods(getAlleleNames)
exportMethods(getDescription)
exportMethods(getIndNames)
exportMethods(getLociNames)
exportMethods(getNumInd)
exportMethods(getNumLoci)
exportMethods(getNumStrata)
exportMethods(getOther)
exportMethods(getPloidy)
exportMethods(getSchemes)
exportMethods(getSequences)
exportMethods(getStrata)
exportMethods(getStrataNames)
exportMethods(summary)
import(apex)
import(data.table)
importFrom(magrittr,"%>%")
importFrom(rlang,.data)
useDynLib(strataG, .registration = TRUE)
