4785460827148bf7a9c08c9ab289c74e *DESCRIPTION
46ef752491b0e2b5c996327c5ff10f22 *NAMESPACE
f188988389ea52e4a1b7c24c11cdb86e *NEWS
cc2d5d08679e9f452c3fc2cc08eea2bc *R/CR-calcLD.R
c14d3653077dfd516776e33b9318e468 *R/CR-cross.R
4e53d3093733b290035010f6a16ef7b3 *R/CR-estrf.R
90b58a8a2d49cd2fb369b5aa6bb7d306 *R/CR-gen-geno.R
353880fa42336af50838cf3532602924 *R/add3pt.R
b4f74683af2a874712a6ef3822014ac1 *R/calc.genoprob2.R
a62c283cd978ee60da65bafd7833ae46 *R/calcmpprob.R
7a1112d9462f63395e926c4761952d5c *R/check-QTL.R
b840c7d3406ebc9151d4677f97d32719 *R/check-ped.R
6a22ef345e730806e3ae359af3708fc5 *R/clean.mpcross.R
4f9a99abf2c1cc6fa748bd32a9da859f *R/cleanmap.R
3cde5e09b5d32cd41cf1f2715e4987de *R/cleanrf.R
ad95242146ba90a2088ade6e93c66ce6 *R/combine-chr.R
7f543cbf2f3e014779b14ccda25422db *R/combine-ibd.R
ad4d6e1698cff499bd87df0c2cc4f02c *R/combine-ld.R
5c53cb9d9a188937b1039631ca908ad0 *R/combine-rf.R
a2ec2853950c86e7bbf7366bb5c493fd *R/compare-orders.R
dde3ef081c8fdd5c768bd37011950b98 *R/compute-bnld.R
6d550471b2fc294df0c9b8504e167185 *R/compute-bnrf.R
e2f1c7433773735e52bfc54ebaaefdda *R/computemap.R
b7087fa502a82e941d4c133e6e5a4c89 *R/convertped.R
cda604a7a3ec7868048da91bff56a316 *R/fill.R
26b851d97a1bb5a5115ef7cd7a13537b *R/fillmiss.R
054ebf65ad5d69809e7d38089509b594 *R/findqtl2.R
1b49a97883fc0b2439df85b008cf8ff1 *R/fit.mpqtl.R
7f5a5f646e083e0894a4bde590b6ae87 *R/gen4ped.R
795336949ff34b064b3957e9eee413d9 *R/gen8ped.R
d717a2bd778e3cdd8f5ea14e417aa729 *R/generate-error.R
0c43e5bbc986da54fcbb8edafdcf0efc *R/generate-obs.R
b71a0f4f31a1c82e4dcb8dfc89e7c948 *R/generate-pheno.R
1e63dcbc753bbeaef3f6e4186d428766 *R/getpval.R
da9c33eff6c0519dde2672b6fc2f8b4f *R/mapcomp.R
9b257ca74442a96a9acbd1fbf1571e29 *R/maporder.R
5b77b740a3fb6a63396c5a8c83184d33 *R/mp-mapdist.R
9efe04ea143c696a4fb9714a90395e3f *R/mpIM.R
cda2e2cc21a35036a2b05edd62746211 *R/mpMap-output.R
218c76b9a3e9a66c29697df9a75338df *R/mpadd.R
676f96dcc9fa793cb2076749acc3b6ae *R/mpcalcld.R
969c2b38b6d872eb181cecc71d5e88cd *R/mpcross.R
d062a3d41dc4a13faf4b12e0d9cf95d2 *R/mpestrf.R
52843df007e40a646878ee167b0559ab *R/mpgroup.R
cf50463d5efee7e66019f446511e7a61 *R/mporder.R
c341d10928cb5031cd6a4df857b1643a *R/mpprob.R
00c3ddf148c90a91c1a3b9b37ae57b4c *R/mpsegrat.R
2fe74ce920eab3a4d1296f62843bcd67 *R/nai.R
bfddb87c8bd11e84a6febe9520c59270 *R/plot.mpcross.R
50334a8975c9cd466c65ef52eba6b5cf *R/plot.mpprob.R
ea97d54741a6137c3ec399cbbb19efa7 *R/plot.mpqtl.R
2a8d0d2ef7b5733178a676422dddb88d *R/plotlink.map.R
62544132a552bcb12db7440897ffb6d1 *R/print.mapcomp.R
d42b109e326c03d76150758c7350bc4e *R/print.mpcross.R
089921eee1564951477c8a10fe125e9e *R/print.mpprob.R
77bc7fbca6f6afebafcefd4a16594567 *R/print.mpqtl.R
9679017d45a73bd581e47e8ec50b7d38 *R/qtlmap.R
9c2e810565b537bab2f242f9a03c1771 *R/read.mpcross.R
2828ed2c99b3e7ead361a1ae6d5b2196 *R/reorgRIgenoprob2.R
d679e57bdbdb947714afa3f5e06a3d38 *R/sim.mpcross.R
1409fddf98e875d6528f3451fa615e6a *R/sim.mpped.R
2b39d0c2829fb78d1f4a85dcc38e6617 *R/sim.sigthr.R
4cdd7b3ddbcc914d631cf6b33a7db042 *R/subset.mpcross.R
9d232747c291fe8c6305c0a501deeef0 *R/subset.mpprob.R
6eaeeca51475fc2398d000dc86e759cc *R/summary.mpcross.R
b5f10c3a8d671d995e9837e68965adaf *R/summary.mpprob.R
7cc6afb32a147b5dfe02993082a7ef01 *R/summary.mpqtl.R
4c5db7e4769a5e309aee65c2af6b3744 *R/supportinterval.R
9726c84db047595b25285a1798fa40e1 *R/waldTests.R
3cfd9a0f948a1aab3e811f2384fd84ba *TODO
4b68c39a16961af9c369485fb19ebba7 *inst/CITATION
2874bee803930539b3f718535fdc48ce *man/add3pt.Rd
2a6dc3963be760267cd26f4f637e38ca *man/clean.mpcross.Rd
499c05ca8a1c673b51820df52654c94e *man/cleanmap.Rd
7df977a3c31e0ae48851824fa73e7aba *man/compare_orders.Rd
68c5ada34b4d937a19f0b6c395bc1058 *man/computemap.Rd
480a49b357ac5c5e61e19b23beed4975 *man/fillmiss.Rd
859cae3b2cd2cff6da640b2415609ed8 *man/findqtl2.Rd
ac0f0825db41b3f86a90a03e24a0a67e *man/fit.Rd
b3f3eac9058cc2f1dba08144dc749536 *man/mapcomp-all.Rd
223264233ae9a131b673526071963ba2 *man/maporder.Rd
b74daecf434a9b31aeae06fbff72baac *man/mp-mapdist.Rd
5e784f69ad14e2076e2e5cb31635a2c4 *man/mpIM.Rd
e30f6f63b1a20f7e47d1f7d607b7f007 *man/mpMap-internal.Rd
a5f9a7ccd34aa872d617db17628388b6 *man/mpMap-output.Rd
a0ed532f77863953aa4304f86f192437 *man/mpMap-package.Rd
648d47777bfd70966a76c938cebd3605 *man/mpadd.Rd
5915e7a0037951ebf56f2dc57be9ffea *man/mpcalcld.Rd
9fd9537a199c173ce10bd8404abf601b *man/mpcross.Rd
6e56089c073ad5a68ae64b6d51eadd49 *man/mpestrf.Rd
23d375e92ab4df0375b1f437d42f95ab *man/mpgroup.Rd
5cd1c9e3070792c45b74db7b47079370 *man/mporder.Rd
74a9d11b1bb718e90d6ef763f6776759 *man/mpprob.Rd
082857c0ab43929be6c8cfdfa598f774 *man/nai.Rd
5726094d250aef5958fba42919cfbff0 *man/plot.mpcross.Rd
7724d1a1ddd39816d1f562479e9b5541 *man/plot.mpprob.Rd
b68f466351981de16d63c1d5f7162f5d *man/plot.mpqtl.Rd
49e30f2e217de7659e17e558de853703 *man/plotlink.map.Rd
70ef3ae73ca9ffd3f8b9c14e3942cbd0 *man/qtlmap.Rd
0dab17229e7151312b15c3d8d0ca7d51 *man/read.mpcross.Rd
578e3fd096eaf9ecb7980962083a5678 *man/sim.mpcross.Rd
8447117ccdcf85d88515bfb0a9e937a2 *man/sim.mpped.Rd
7b19c9d7344c30e7415a8003c0a6d48f *man/sim.sigthr.Rd
5af089b20bb4f6849c2251343cc97b8b *man/subset.mpcross.Rd
2751be3acef0ad640919f9b0b50a10a0 *man/subset.mpprob.Rd
4247785e9418c7bb83adaf7ee1c60f85 *man/summary.mpcross.Rd
c6ac4122a4a0ead687da63539856a150 *man/summary.mpprob.Rd
789155dd487791fbbdebdc2224c6249f *man/summary.mpqtl.Rd
ba9e223aed25852f64d408ba4681418b *man/supportinterval.Rd
7490911e8f7d643e78326eaf036a5885 *src/3ptscan.c
5d060e5c97ccfea3fecb397a6b0dfe55 *src/add3pt.c
8af8947afe735c92e654b7fe392deef4 *src/all.c
f11dee65bafc834c3d0ad13100cb4567 *src/calcLD.c
2472e7611c1df13e17eea26fe49523fd *src/founderprob.c
504ce21727a447f3e8df65aced79d6b4 *src/mpMap.h
d68eb85334fd1202f31351181e99aa2e *src/pf.c
2c28a3ee5950cb0eb9ec505724379785 *src/qsort.c
680a9ae3b5b2e62a3366f01d69ec5c96 *src/rngs.c
1015e8d05b25fddd8b7063bfdaae157a *src/rngs.h
ba6881602fa17bc199a28965b522558c *src/sim.c
