4f85a6b11ecd75afdcce423ae15ef005 *DESCRIPTION
7c52ffa536a7ee404a1970079f438922 *LICENSE
b48ef5d987897d838df5226751680a0f *NAMESPACE
5e08e4dbc7bfa1bf575f7672aff13441 *R/RcppExports.R
4a8c3c169d90a573af79901ddb0ca2c9 *R/auc.calculate.R
ed324fe13967373f0ebff75d176d8d6b *R/compute.gene.rank.R
643ade498aab0c7b5410cb03dbb9a50d *R/data.R
569f9ac6273c770b4acbc3eb65b362fb *R/inferCSN-package.R
716a11cb5bd17fa513da07611efc9f3b *R/inferCSN.R
715a9aeffcf51cf83312d5c9d6ec328c *R/network.visualization.R
b4a2e0f8aea24b0352519f018bdd63e5 *R/sparse.regression.R
ef4b9e9703cb364732029f703ca9f1ce *R/utils.R
82246917ca7839687f6d51eb34f8eec0 *README.md
191a298ed75823937c77adad132f746b *data/exampleGroundTruth.rda
975775272629b1e1438f9c89883e7728 *data/exampleMatrix.rda
9b9c13ac9a7e999c4e4cdb362fc26e8e *man/acc.calculate.Rd
8380f5d6933f4f8e23c17f11c7c50423 *man/auc.calculate.Rd
ff07637def41124927f3c7f2c46f1bed *man/check.parameters.Rd
cd8c767751171c96e056e3d80893d6e8 *man/coef.inferCSN.Rd
18a544c85e9b0245e63f713998214767 *man/compute.gene.rank.Rd
0e2acac6074c6d1148f7157f2166271e *man/contrast.networks.Rd
7bead10dd1c0c7852051d259b0740edd *man/dynamic.networks.Rd
554c357e8f5247ccc09bb4b0230833c9 *man/exampleGroundTruth.Rd
1ec939db9239789791c034ef6bfd2265 *man/exampleMatrix.Rd
6311a5f421c0bbf0b94debea489ffb13 *man/figures/inferCSN.svg
34c2dd574f80faa89edea7cebdbb042c *man/inferCSN-package.Rd
54bbfb391679a8b0ca879d51303498c4 *man/inferCSN.Rd
814dd419ee7301a4e93848a20890ad01 *man/inferCSN.fit.Rd
af3a9d9f4bbf39e214377b9920d4d3b0 *man/is.scalar.Rd
0e559044dc2fe9b06b8d39132892e548 *man/net.format.Rd
447aa592fb38dba8e88937ed73204801 *man/network.heatmap.Rd
e9d98b090265e8645318543f37e8bf24 *man/predict.inferCSN.Rd
1b4a2a6e2c1eed3ca4a3a0003c5c97f6 *man/print.inferCSN.Rd
3fcd8c319587d585129534013633c858 *man/sparse.regression.Rd
73197635a9a5df894c4f5b4e88ca4e8c *man/sub.inferCSN.Rd
1e6750ed9d5f86b882e6a24591733b47 *src/BetaVector.cpp
dadb1987bfb2f80d199a2e25b02a051d *src/CDL012LogisticSwaps.cpp
64737baec03e2641f58d5681381874d6 *src/CDL012SquaredHingeSwaps.cpp
45e55da928a9a22670c9a7380e7469b1 *src/CDL012Swaps.cpp
b9f4edd41ee1ba186d768676b2bf79ee *src/DT2Matrix.cpp
d4f2e65104193ad8b04b23281a39cd8c *src/Grid.cpp
51b6baa37f71f76d69bc5e178c98b8a7 *src/Grid1D.cpp
8748c274ffef69c8dc7f2c0f88228b22 *src/Grid2D.cpp
09837ef4410ca3aa193eb60b7a8f681b *src/Interface.cpp
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars.win
41bc93afdbfbce896558b943b882d7e7 *src/Normalize.cpp
bcd102094770a2e20628f6cb0dfc4684 *src/RcppExports.cpp
b8da420687f2f9943625f9c8cddda799 *src/Test_Interface.cpp
053756d599fb6942fb1959c5f54f4157 *src/include/BetaVector.h
d10d7cbeac8dd66edb8abfe537ba2e83 *src/include/CD.h
3006562807501591e7979d1b5af7c039 *src/include/CDL0.h
c9262d8cc37f5ad121511ab15f1ef234 *src/include/CDL012.h
da6865571ac3a696ef96d8d10c8b7c9a *src/include/CDL012Logistic.h
c36020aa6b5463f99a6265a18d745473 *src/include/CDL012LogisticSwaps.h
75978be275c2af4e57318dda1d2ee505 *src/include/CDL012SquaredHinge.h
6acf66ba1b050b4869097aa56ed7cb10 *src/include/CDL012SquaredHingeSwaps.h
8d625ee2d1001e5fbd827359787faa78 *src/include/CDL012Swaps.h
3c65caa73f70506f9914640898d13c6a *src/include/CDSwaps.h
3e191a22fe2bee08cfd53dd8cd32f8a1 *src/include/FitResult.h
fa0e95061a24b8e548c611d4304664d0 *src/include/Grid.h
1e34795fcfd7f91aa821223794050e00 *src/include/Grid1D.h
5155c4b89da70421f47b4e82a0111866 *src/include/Grid2D.h
29346ba8476c3664856ab8f5ae9ff180 *src/include/GridParams.h
3754bebf455414fb993fd10bfc967742 *src/include/Interface.h
68b70f6c4a8c08a8d7f6bb97746d3d49 *src/include/MakeCD.h
aea94cb863ab3243b5c681f9d905c175 *src/include/Model.h
8650499eeb16d4bf88397c8ed3c29c92 *src/include/Normalize.h
060e465c4585fd95bb6ca465645051b3 *src/include/Params.h
0816e979947d47e1e91c6327a62d641c *src/include/Test_Interface.h
f3a3cce4a45a5306180127b28e5aa66c *src/include/utils.h
82ebc8c76e0a000e5bf6e391edd49ff3 *src/utils.cpp
38d99785124ecc9d873a36f2f4fff8c6 *tests/testthat.R
33d718ae56a0c2bca1ffe606a3e8d47f *tests/testthat/test-inferCSN.R
