902fb66752cc72ddc12874efd123da20 *ChangeLog
9daea5a1735a4c6b192d631167b48e2a *DESCRIPTION
9baec021d4edc8fb831d839932fdeb39 *NAMESPACE
ff9d69e47f21a3c85bcc4283bd508c49 *R/GPrior-classes.R
931de3028c29441c974258ef270ee191 *R/GlmBayesMfp-methods.R
61670d4324a9a9a4b69fc658c8f33473 *R/GlmBayesMfpSamples-class.R
4b7a2443a0b8057cfdc01d209708a819 *R/GlmBayesMfpSamples-methods.R
3418bf0af8c9aba3ba719ccadb602f72 *R/McmcOptions-class.R
f0b0966195f93a9c0a35d40f77dce442 *R/McmcOptions-methods.R
df733a64ecddeea56e335a9719ee3988 *R/RcppExports.R
79ea1153a7d07ed8c749770944bcd01b *R/computeModels.R
24a66b12ca60c179bba8ef848d4e9fa5 *R/constructNewdataMatrix.R
b29bce96c982b7623dd0e606ada966b9 *R/coxTBF.R
26e884419e17656fcad7c59d55ef77ce *R/evalZdensity.R
d757ba903d953abf50075cdf367b857a *R/formula.R
9a2b25b3f5e9ab04f62de50195e938ce *R/fpScale.R
d1a317b2f847d0188b85488f9282f497 *R/fpTrans.R
d484b47d29ecf57066e33b3aaaf7d0e2 *R/getDesignMatrix.R
dae66a5946ad04adaedf407dae1bc858 *R/getFamily.R
2c661b5c1d4220da4bcdbcc18d87ef3c *R/getFpTransforms.R
e94ab8dea7c29c117ca0734b10fcff94 *R/getLogGPrior.R
d2f3dc7addeba69cc18e9aa09d5f2bf5 *R/getLogMargLikEstimate.R
48b059cfe728ed4d3d0c750327b24311 *R/getMarginalZ.R
d463af3b7446bc0e1147e5ab966aebf9 *R/getModelCoefs.R
8ac7f2e20455353e2a98d588a7f15837 *R/glmBayesMfp.R
349e48e632275c2c8c34fdfcd4b8d33f *R/glmBfp-package.R
fb8a322c4c740ec22dd313cc639e2e68 *R/helpers.R
35c575bfc28f386289e40c3860cc7ed6 *R/hpds.R
fd9992498f11030912f29f91af0f28fd *R/inclusionProbs.R
d5f45b6b6ea20df008acd6f8140d1a29 *R/optimize.R
8239be38899e830d11686d958e703075 *R/plotCurveEstimate.R
ca1885c8458abf108b6c9201a1d41fc6 *R/posteriors.R
828dc04ab71c53ca105fcaeb88610f36 *R/predictCoxTBF.R
04fc26c9daa1c58d0f646f7abccffadd *R/sampleBma.R
7a28dc0336d85a7fbcb83e8d3f1e23b7 *R/sampleGlm.R
d234afe51582e23b9ef0b7b1fc3b1efe *R/testCox.R
0ed78ebb9d28d6802fc7906426eb4e67 *R/uncenteredDesignMatrix.R
a0c13f7a0af6b55f36bff6aa6ae0f103 *R/writeFormula.R
4d42f9cfbaceaad3c12c55c4445696de *TODO
f09e48dbc587c3639cc88aa46345f92d *build/vignette.rds
b6a92d13c2e484edbdd1aff8bceba3c3 *cleanup
702867a500b3bc31c3307610aaa23270 *configure
5de88376a61d665c8239380c8b4ef7ac *configure.ac
9e5ffc5e94d9813bf01d206b78bf72ff *inst/CITATION
0b598e5052ce3023dfe59e45064b25e3 *inst/doc/examples.R
52754b93f41deb545d3ac2bcead64057 *inst/doc/examples.Rnw
d4138f69bd009b22136da430091e096b *inst/doc/examples.pdf
19faf5572cbf03947c63c186dba75c80 *man/CustomGPrior-class.Rd
0e555388a6d9f3499df483db90f55807 *man/CustomGPrior.Rd
652adba97348d89268a708f128d7d377 *man/Extract.GlmBayesMfp.Rd
ae0499ef75db8449b7f47c37993eb05a *man/GPrior-class.Rd
c9a742d911cbfb7a317492f1a6a03f6d *man/GlmBayesMfpSamples-class.Rd
a0a169097ebd48b55fabf8085344abd5 *man/GlmBayesMfpSamples-subsetting.Rd
5fb83b7efcdb5260df1cba1e3e46863b *man/HypergPrior-class.Rd
0c1cc682fa7e8d47d24e1780a79cedb7 *man/HypergPrior-initialize.Rd
aee80a18f7ac1b8789efa53a9e7c55cd *man/HypergPrior.Rd
cbac8d09792b3944c89c3a4a7430306b *man/IncInvGammaGPrior-class.Rd
f8d9aea484fdb55d6c6f412593717bfd *man/IncInvGammaGPrior-initialize.Rd
939d745f873e4af05d7a518c89d35702 *man/IncInvGammaGPrior.Rd
69121c09a4e364a3c32b4d5a62b852e1 *man/InvGammaGPrior-class.Rd
b3970b014af1ec0e0d76ec00bb555e0f *man/InvGammaGPrior-initialize.Rd
679ab2a31a6820b2c9e43d3457424e59 *man/InvGammaGPrior.Rd
52281a626643819f7f0dff58fdfdf9ed *man/McmcOptions-class.Rd
8827fa2d11d8953eb77f440d3c86fbec *man/McmcOptions.Rd
327dae134ce92146d510816df86e0f84 *man/as.data.frame.GlmBayesMfp.Rd
086165ce49ebb16075221cea5d078a97 *man/boxTidwell.Rd
50e891cc16fc3a13bde6096d2c25db28 *man/computeModels.Rd
4a31b19f9096d397384db96a8f8539cd *man/constructNewdataMatrix.Rd
9d66e2656964c037525bfe9e4a5b4e2b *man/convert2Mcmc.Rd
9b2d8c9512a53ff73cff7ab3fc6783d4 *man/coxTBF.Rd
93d9935cdb9ea5e65e5d3b884279e0f9 *man/cppBfgs.Rd
2b436ecf6119b37db0088647c1ea648c *man/cppOptimize.Rd
5891e16000d3951d2e7041ff727be2cc *man/empiricalHpd.Rd
fc0c7d50827cbf748b5b50638a741553 *man/evalZdensity.Rd
2bd671963c792d287969c15422730721 *man/formula.Rd
daf2336469b5b4a9890c47ad54f689af *man/fpScale.Rd
9884cfa975a3c157d851a963e96520e7 *man/fpTrans.Rd
b4a551c8aaf8276da4821a044ba171be *man/getDesignMatrix.Rd
9d23153b7dfe041fd93538ffb134f3ee *man/getFamily.Rd
3aee0a572d798476b13b2c03eb49192f *man/getFpTransforms.Rd
6e82c053d3bd7538eb272e3cdd53769f *man/getGenerator.Rd
bb014e334e98835135d9e061eb139904 *man/getLogGPrior.Rd
948be60947bb6356cb3209ccd1afb207 *man/getLogMargLikEstimate.Rd
3d6445e659df94e6c9f655f1e80f3162 *man/getMarginalZ.Rd
91b244dfb1ad4b7c5c50c5af3e8f2070 *man/getModelCoefs.Rd
495bfcbcdf1a68ff7bd95e12749087d6 *man/getUncenteredDesignMatrix.Rd
816f9b6a689024644d83475b81a41d9c *man/glmBayesMfp.Rd
fdd1edd6818666f8a172d4df31b3b0c1 *man/glmBfp-package.Rd
312194ec563b1770cad7190066c6aa0c *man/inclusionProbs.Rd
cee56223a99499719b6e9e8de9628aba *man/is.bool.Rd
762ea7bdfd61e24bb57003353a25e328 *man/logMargLiks.Rd
e01d6103b370569a71c92b5a1ee06a5a *man/logPriors.Rd
fbb301ac23509bc05cdfab4a22375871 *man/plotCurveEstimate.Rd
fb1d4b3da944b8fee6e3a7d732181b0d *man/posteriors.Rd
7234bbaa655d57c3d2ae5c1db33cb3fb *man/predict.TBFcox.BMA.Rd
d4cf3d83aff66c46b5261c33a5cb61c9 *man/predict.TBFcox.Rd
db513024dcdc358a4b1425ffc2993db8 *man/predict.TBFcox.sep.Rd
2d4ae38e9c96fee1c758af6007cf9c71 *man/print.GlmBayesMfp.Rd
1553fa419447f8433e7e8902c3533d38 *man/sampleBma.Rd
3599e960c240ae30ff2cf89d8d115ae7 *man/sampleGlm.Rd
fa99597f4e1847bf13042f1a82e58fa3 *man/sampleSize.Rd
397bd7537a792c093f8f2c6c15747e50 *man/scrHpd.Rd
fbe97c90f93e42be9f684c7dc63051d9 *man/testCox.Rd
d321bd25f3864f058a6386a7abf308b9 *man/writeFormula.Rd
2c42787c15cf27f2a8c1f5b40ddd929f *src/Makevars.in
ed6a4aab9014daa5562bc202d9f3bf3c *src/Makevars.win
7cfc7b22054487c032c7f8de32f9ab68 *src/RcppExports.cpp
313780a1b5d9fed8971402d288fd444f *src/bfgs.cpp
ac84d1166072b9127184de76bd0d16b4 *src/bfgs.h
2b36094ca0c4341949fd998ce3a8267e *src/combinatorics.cpp
5986efa30aff16b1d225d5751a5fa415 *src/combinatorics.h
ce3de93bbae5c9199e84bca233956008 *src/coxfit.cpp
ab0a939e9d5385fe135b241a12413348 *src/coxfit.h
80adff1b73e5f55957218836e63452f0 *src/dataStructure.cpp
137ff593decbb51dc93635c949f4ef16 *src/dataStructure.h
6215b4b0e6219a60ff6649f2c69505ca *src/design.cpp
b406221a4a71f90bc3f0121eb469f1a1 *src/design.h
e0a45f8ce1e21a797a5b1357a53dd0b7 *src/distributions.cpp
c34ffb89201a9b1694bd9170b915e02e *src/distributions.h
a0a57a1b3106550be1c31413fad8539b *src/evalZdensity.cpp
ad11925425d1319dca47a8c2d2578bb1 *src/fpUcHandling.cpp
2e05c245e363ad458697cfa94b74c434 *src/fpUcHandling.h
a9328f8c2446bbb61316452f1e65dfe4 *src/functionWraps.cpp
dad8a72e31bd2238271c5d8f6ba28434 *src/functionWraps.h
93bdfee9499ea0d21019fe1969f7ea5d *src/glmBayesMfp.cpp
b5555ffb98b0908e6a86bde05164133b *src/gpriors.cpp
745a523056999845447fcad374c64ade *src/gpriors.h
92db2e341b0bd0b26fd8bd793f583efd *src/iwls.cpp
ab7be37e3589f95058a3b55a2333acad *src/iwls.h
b2f70c0d8bf7be39186a65d91cc1f729 *src/linalgInterface.cpp
095faf8af655557faebd0856c63e3ae9 *src/linalgInterface.h
7e5218285bb0123f9c30349d36665396 *src/links.h
c25c2833f9b89fe2f5a960f092779e9c *src/optimize.cpp
72d1cb02c3f0ede05f06840b5fe5ba0d *src/optimize.h
9d0e3916f3b9a664f93b4949fcadb1b5 *src/predBMA.cpp
91fb52a7887491c843ca76d9213abb36 *src/rcppExport.h
441ccd14628d104d51bc72961d3b84ce *src/sampleGlm.cpp
028eda22c65450e9bc874a52c5e874ec *src/sum.h
de786779296191173f6f96dac36f46a0 *src/types.h
7eee2c45604c2f75f75a7c6482af4087 *src/zdensity.cpp
d33959e6379f1ecd2ffe8dbcf71b6922 *src/zdensity.h
07678dcfbaa6cbbc7e516bbaf5bf689b *tests/optimization.R
52754b93f41deb545d3ac2bcead64057 *vignettes/examples.Rnw
c63a61763a1528a1cadc3344025d1064 *vignettes/examples.bib
