1207ece11c51ed9bd6e4ba30e18a9640 *DESCRIPTION
277ede90712992753221e33ae567c08c *NAMESPACE
086765a73351b67635ad3ad3c0137a3d *R/aaDistribution.R
02591f6920fa502319662212c9bf137a *R/clones.CDR3Length.R
5e1a55d5489088014bbebea3cbd0370e *R/clones.R
3cb2e1ccf626656319c7324ea5383e3f *R/clones.filterFunctionality.R
ce1fb501f22c5824856d79bcf81e2763 *R/clones.filterJunctionFrame.R
8bae874e114631db769db19b55c5dd4b *R/clones.filterSize.R
4d8d67384e9d32c1f04ff0500e0c0fb9 *R/clones.giniIndex.R
b8334f44e500a254b08ffc4dab241e5d *R/clones.shared.R
794c4cb0a9ed7038af3b04458a7b7db6 *R/clones.shared.summary.R
8f80b573fdacf334060f7267a9003e3d *R/combineIMGT.R
435406a08a0a875c09da44f5d32d1f0b *R/compare.aaDistribution.R
c2c40a98149ebfd18454aed3be4dba3d *R/compare.geneUsage.R
be865fd2afe4f588c420a807e1846147 *R/compare.trueDiversity.R
706c8a8091384067924b33839e4321e9 *R/geneUsage.R
bde64f8a84088e5e540e2a8202ce325d *R/plotAADistribution.R
5a577ba3e9954470322fbca7128e2e1a *R/plotClonesCDR3Length.R
97c209055a09782fa65c3e734594f693 *R/plotClonesCopyNumber.R
1e5a1073593373e66431e68b50073f24 *R/plotCompareAADistribution.R
cd31e32348b5ddec086c54c4d5545b5c *R/plotCompareGeneUsage.R
c87f789142352463c46b72ec8429258a *R/plotCompareTrueDiversity.R
bfd333cfe429f0ac0a3f2a29e66e1bde *R/plotGeneComb.R
ab95d1c85a8aa365db3938a81394f72f *R/plotGeneUsage.R
6e259f04942e5356bd147d101d968554 *R/plotTrueDiversity.R
a8f01409a69de76992ffdb3cfa96de50 *R/readIMGT.R
0c1ff0f17b93dcd9a72961c83bebd09b *R/sequences.functionality.R
83edf3914e1e0ec2462915a87079051d *R/sequences.geneComb.R
e9d4620b65029ad38e73261095c51f4a *R/sequences.getAnyFunctionality.R
6aba60deaf1ec9e212073d8d3627c82e *R/sequences.getAnyJunctionFrame.R
a6c5b5692d13ff76d254c4807b275b6a *R/sequences.getInFrames.R
171c10f4c50875b4c458fdf6475cdd15 *R/sequences.getOutOfFrames.R
7243f6192880758216e60bd34d4277f6 *R/sequences.getProductives.R
5c364582500261e1970b07744a1665ba *R/sequences.getUnproductives.R
a580779d22b8952f10eaf163f6f8b52c *R/sequences.junctionFrame.R
6a75696daf231b68a8a85ae3ed671020 *R/sequences.mutation.R
b97e7f3485d1c170f881fd48d54b9ec7 *R/trueDiversity.R
f99fccc55fa9c0b10970306d295cdcc6 *build/vignette.rds
725e6fb5ef22b5e1fb264c2ec1bdb6a0 *data/aaseqtab.rda
a402a38483c05bf013075ca27d5e944a *data/aaseqtab2.rda
6c6395d15b83fa3ed3f621aaec2b67fb *data/clones.allind.rda
50590df829c10679d071dfb13560feca *data/clones.ind.rda
50f5476a3d17177d62ffb1f21294e7de *data/mutationtab.rda
b50ce7d213452cf4ef47fa69a5b866b0 *data/ntseqtab.rda
2ffdac7936f94a6c91f54652018cd290 *data/summarytab.rda
81d7c3b675eac4441dec0c0f5f9d691f *inst/doc/bcRep_vignette.R
91d35709a1c0585a86ac3dc3e31246fe *inst/doc/bcRep_vignette.Rmd
20ee91fd769e1341afa77c1412571ab6 *inst/doc/bcRep_vignette.pdf
cf359fb1210ed209e608673ee75be518 *man/aaDistribution.Rd
746f08843db207acb2e2cdaeb2a992e2 *man/aaseqtab.Rd
9e45bbc4d5919516cc9bee81c12a04a5 *man/aaseqtab2.Rd
e509ebfb2bd28eaea2bdd14ba5f644c8 *man/bcRep-package.Rd
89d1d84e3e2dcafb0952515c3af11ced *man/clones.CDR3Length.Rd
13b1379a8c5b52804eade684c8f062f9 *man/clones.Rd
3a33cd6cb452d735250714f0db6a442b *man/clones.allind.Rd
a8f6ebd9caa5da7b9a11348956f5ebbb *man/clones.filterFunctionality.Rd
db1d70e4b97de6d46e1b200fccc27338 *man/clones.filterJunctionFrame.Rd
51b5d74db75018f3bc3cfadd84a8bce0 *man/clones.filterSize.Rd
e8ef117ee71255074cde9b2ee0ebc578 *man/clones.giniIndex.Rd
f839fa2b6c4e9012c3b6b2a953819862 *man/clones.ind.Rd
0b622efaf81f7c8dd6dc89a064bcec52 *man/clones.shared.Rd
7263e5c80a6879c207d23930855021ae *man/combineIMGT.Rd
13be9f31b9322371c3057647d6efc597 *man/compare.aaDistribution.Rd
fb8cae5580791b3bf499a86c8d12d48f *man/compare.geneUsage.Rd
d2b4b0dad9ebd11d788dbf046189a77e *man/compare.trueDiversity.Rd
a70b49b695761cdc05c8a42624883ab9 *man/geneUsage.Rd
c53afebf988f053d2feef5e2d5d47fa5 *man/mutationtab.Rd
5299f87fdcd4e88cdaa23e062f852647 *man/ntseqtab.Rd
9bf09dd077aeba7ec256ae4a992b3ea3 *man/plotClonesCopyNumber.Rd
0a195cb094f2e53fd1b87b67eff25f98 *man/readIMGT.Rd
16517f31583611d729d75f7746b99e9b *man/sequences.functionality.Rd
fd7890e36b2da1e717a3206c6433ba32 *man/sequences.geneComb.Rd
43312f4191a35261ccbc2ccc581ccd81 *man/sequences.getAnyFunctionality.Rd
5531deff84d46f7b65e57023b540f95f *man/sequences.getAnyJunctionFrame.Rd
dc90b8777389e441ca3190cb17761506 *man/sequences.junctionFrame.Rd
068e6de47750bff6fe80ed13af755f9a *man/sequences.mutation.Rd
bffb2fcc612c5626850808b456b9ad80 *man/summarytab.Rd
760f9a7040dae712ddf7db6fec9511d2 *man/trueDiversity.Rd
91d35709a1c0585a86ac3dc3e31246fe *vignettes/bcRep_vignette.Rmd
6fd04a3069a22eef2e891a0f5d70ec59 *vignettes/bcRep_vignette.html
