f2ed2dbc4a600bf8bea8cd2db76220e6 *DESCRIPTION
2d073946327993e0646686914a6dd278 *LICENSE
6249657f3a4f555e78e37c1cc489aef9 *NAMESPACE
19a5852f1dc0c27e14fc6c24e27aaf8e *NEWS.md
567d6a60dc1e325285def7be24b9bbe9 *R/Fast_analysis.R
13f41940d13c80862cbd131382e5c057 *R/Fitting_Models.R
8c076f38732643fdd811a99e8f34a365 *R/NSSHeat.R
9e723a420a01104def336c5ae1f0cde5 *R/Simulations.R
9fefe44352882528065752d875782ffc *R/TL_stan.R
d600c632376c84232ab2dd2a1b6c0ff5 *R/Visualizations.R
61f2269ee3a222e86200b82539c485d9 *R/bakR-package.R
19292b5263526b7d5e2f0930cb9ffd3e *R/bakRData.R
ee0bf111ec1e39669bb6906eac6c7e09 *R/cB_small_data.R
9457e4f323746de9b97e2a03e3579d70 *R/cBprocessing.R
032abadab9a3c3cd8b014ecd61ec4993 *R/metadf_data.R
f5793e57b25caceab03e52f38c5136f3 *R/stanmodels.R
fea4a931aa49809f02d11546d56c80cf *README.md
d387888bfe85cd40f72009c99caa591f *build/vignette.rds
7969fe5784078463b7357177ca30675e *data/cB_small.rda
6e566aea8afbde0670acbb346685d1f7 *data/metadf.rda
a97e7247db43a973691d4e6954c99e7c *inst/doc/Further-Analyses.R
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dc7acf51445098fe368bd76980fd2f69 *inst/doc/Getting-Started.R
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68e634e96da03d5e6ccb98b759473e55 *inst/stan/Hybrid2.stan
e80d9e1ffd78b127cac2c81993556ead *inst/stan/Hybrid_NSS2.stan
e21777dc29266dfddd0c49b8674d0150 *inst/stan/MCMC.stan
1e8bf3ab62cd156c98df61c385210b22 *inst/stan/MCMC_NSS2.stan
c50711ac2f1133de96cf7446c2c3a76b *inst/stan/Mutrate_est2.stan
d3934e0654efe6862f30330cc971e2f1 *inst/stan/include/license.stan
e606d9763cb6c9ed3a7be76e0c56aaec *man/FnPCA.Rd
a4d41acc3f51f0148d79849947239cae *man/Heatmap_kdeg.Rd
083ad8ac247da499d49b5ca70130c1ab *man/NSSHeat.Rd
5a0d0739042d3d691232b7a9d684c8a3 *man/Simulate_bakRData.Rd
39f3ded46f2228b77ea5a84ca0d9a0fd *man/TL_stan.Rd
f7e46ee26c2375450d155996dcea2425 *man/bakR-package.Rd
303273e28e55690cdf6ed799d8f2be8a *man/bakRData.Rd
9dc79b40bdd8d83c80ad4de40193a311 *man/bakRFit.Rd
fe08661ef14df0a838f50c689dbc13a2 *man/cB_small.Rd
b0c45b35fc0a4e39634bb8f906a0c6b9 *man/cBprocess.Rd
2686e42f7e32a64636647f6109cf8283 *man/fast_analysis.Rd
c7949115fa74de2fc00263e6ef5586f2 *man/metadf.Rd
cc3e395bda6c119eda83005b10d46d28 *man/new_bakRData.Rd
bbc38aefe736c3f9cfdf961a60f0a8ce *man/plotMA.Rd
acbad6c777e21646c2e5c7cc82ca27b2 *man/plotVolcano.Rd
7299d9d0998409bd7760c7f208358e45 *man/reliableFeatures.Rd
1baebf40e50c7131e7feffc3528ec7fa *man/validate_bakRData.Rd
206a1183386165c922ae6dd37d7378e0 *src/Makevars
66d6aef607935be5ead2bd71ebf6e98f *src/Makevars.win
e2da8eaf4e7b831aacf8f8e4b84eb685 *src/RcppExports.cpp
143775e7190fbe75f3ffcfbcf8a2e9eb *src/stanExports_Hybrid2.cc
4535ffc99781643b8a008e529847a208 *src/stanExports_Hybrid2.h
fa7c0a9221284551760d0b0aa78466f9 *src/stanExports_Hybrid_NSS2.cc
deb3be21cfa496d107e42d646d2f0acc *src/stanExports_Hybrid_NSS2.h
6806a22641ed4d01b8d972fde798ab3d *src/stanExports_MCMC.cc
2edd8012183b1bf04587b7f03db9251c *src/stanExports_MCMC.h
74d8a84f91680116ee339876b26f359c *src/stanExports_MCMC_NSS2.cc
5d74dbea227fd118f859acc14d3159b3 *src/stanExports_MCMC_NSS2.h
ac101afa8ec69af14385cac0cf0f971d *src/stanExports_Mutrate_est2.cc
d291755f837bbd5a55c6003027bfe567 *src/stanExports_Mutrate_est2.h
439ae9db0424ca7af986b8138f39f29a *vignettes/Further-Analyses.Rmd
e5eee1785e63fd71a483ce87c3d06e97 *vignettes/Getting-Started.Rmd
f70b39ccf4378108e4e238ce8c476ec8 *vignettes/NSS_Analysis.png
