8a1cbe774528bf39facd7e34dfe95e12 *DESCRIPTION
730db026d6fa090aa90054c7d003f1b1 *NAMESPACE
c35e48d9218b1c416b705e40d06539e1 *R/categorize.variants.R
ab60329f33c08343b041ef1159b8e169 *R/check.args.R
fa33c670f8b237d6dc5fc8f9acc6fb67 *R/cluster.strains.R
aa497eb4dabe8cc9510f2d0c2cacd2f2 *R/convert.genes.to.GRanges.R
4d2a103b20c9babf90504a86ffcbc30d *R/convert.pos.to.GRanges.R
f187f30ea943ca0ba40471f7d0c63cbf *R/convert.pos.to.bp.R
1305e7f472890e1ede5392a658e29a17 *R/convert.variants.to.GRanges.R
585fac1a4cd09e8a23faadcc57fcb8d0 *R/convert.variants.to.numeric.R
a30fef83a31e2e69257b2d3c62569af5 *R/create.pos.R
3423eaa4c62bba57956b7b72f44fff5d *R/find.overlapping.genes.R
b5d227b26ab6dbef2d50c2711f791e7d *R/gene.plot.R
4e967b1ea4cc0ee640f01a139b0a43b6 *R/get.mgi.features.R
891105013aa52c60ba8e3da7b796302e *R/get.pattern.variants.R
ae1f8b4203fe5a920c1d28abe7dcd7fd *R/get.strains.R
b61590a54de9ce5d05d1e2224f0f5f9a *R/get.variants.R
6eea3ecfe292fa7d42985e85cb3982b5 *R/snp.manipulation-internal.R
9881ad87fa3680228966975584ad4f03 *R/strip.quality.columns.R
b61c9487e5c06546bea1eabbc2e3dff9 *R/variant.plot.R
31a1a9e4bdee11967a6e22391c4e8d7d *data/example.genes.rda
903a06a5ad46c7f333e985889b432ffa *data/example.snps.rda
cec87f0be1b239b9897979b056184787 *data/qtl.rda
8537a8f358c8a6c32fcf6824f897fe8d *inst/doc/SNPtools.R
09dc199a9767ec585adbd6f4e101e9de *inst/doc/SNPtools.Rnw
40505e6f3737bd62ef0f015b1006d13b *inst/doc/SNPtools.pdf
793006332be7f9e978b4c6f25a025028 *man/SNPtools-internal.Rd
eb7288b283e3d678e93b20eb7154d9b4 *man/SNPtools-package.Rd
9acce9aaf3e73073cf63f5227dc73b73 *man/categorize.variants.Rd
f648306b7a44d970ef1337a43aae2fae *man/cluster.strains.Rd
6a9f8a6414eb32ebcbf503b166236750 *man/convert.variants.to.GRanges.Rd
cf1d3f771a314c3bf893b00d29b831a0 *man/convert.variants.to.numeric.Rd
c3acba1080cacf0319df26c67a8febdd *man/example.genes.Rd
aad0a672bcfcc181350fc205de527578 *man/example.snps.Rd
02f449e3c16e0d2f4b38017dc04635ca *man/find.overlapping.genes.Rd
8b7d1667db945ef6d46c96efd761d28c *man/gene.plot.Rd
7ee3ed87b97b5c5549aa8450838b5b7c *man/get.mgi.features.Rd
b6dcf90952a4c6605411861289e19fdb *man/get.pattern.variants.Rd
c0ef6e21e52df1e79a89c3513dcabc05 *man/get.strains.Rd
9a9d5b07d3c648edfe5ef84051df32ef *man/get.variants.Rd
d7f0f0483e76ea11ddf2f9b6a53093ac *man/qtl.Rd
056adce3bd101a51e05b6200683c528a *man/snp.plot.Rd
1331e9c0885f7f8fb1bf1906ab3722e1 *man/variant.plot.Rd
54859d0ec3689946af775b93b42f2b3d *test/SNPtools.tests.R
09dc199a9767ec585adbd6f4e101e9de *vignettes/SNPtools.Rnw
