4cda3f789fb11cf8e2dfbef89ec8e6b3 *DESCRIPTION
bda6b25d9da178a05aedf4861f252ada *NAMESPACE
58adbcc8d58cef42094cfda9c838a990 *NEWS.md
0eb79eb78819557455c74b01430627d1 *R/data.R
23cac60ae3d06730ebd50ab9adfe1d5b *R/dimensionality_reduction.R
871f050e30b860fe1c011bc12a0ba4ee *R/dummy_proofing.R
a44cbe4ae73d8fca06adfe23a7387b19 *R/dynwrap_integration.R
d361aadf558f4bab012a6060cba3e50f *R/extract_modules.R
0370ccaee9804d813336f96de293e3fd *R/gene_importances.R
85a2e1011c6705f700fd1711ee559b2f *R/package.R
131ffa7553a321dbf19cd787bb8c4f9c *R/plotting.R
cd2a9d1fc36cb2e19ec16192d2a31e86 *R/scaling.R
9249fdf621f53a12946fd41db07a9d53 *R/trajectory_inference.R
a10f8728d57925068f1e4bef190edbe7 *README.md
f359e7478fea933c6a455e192652173a *build/vignette.rds
e37f3b5959cb3801a4abc64967ecf3c4 *data/datalist
185be754adfcb71888fee9c4575e1253 *data/ginhoux.rda
da049c477262ca4a13f6e0baafcfd3cf *inst/CITATION
477737af112278504ec840a8a1710a95 *inst/doc/ginhoux.R
184abad7127b1ba0a711128a7656209b *inst/doc/ginhoux.Rmd
fb3429f0b4afb6d24dd5ab0f7e33ad1f *inst/doc/ginhoux.html
ffed32807c451035f2907ebe0364fdfc *inst/doc/seurat.html
dcbecfef9a8458acc7101c5c6b37cbf8 *inst/doc/seurat.html.asis
98b3b15842c4db6d03c0bd930162c904 *inst/doc/simulated-data.R
3d792e877a2c5832d1f35d04c8095183 *inst/doc/simulated-data.Rmd
51b78723b34d09d9d51e249daf706de2 *inst/doc/simulated-data.html
3147d522d618f2f3ee3bf723bfdb3ca1 *inst/dynwrap/definition.yml
5b3eb3bbf40c59118bf6a585ea08e819 *inst/dynwrap/example.sh
377e784cc163c4d2c291c70bf1c4f5ac *inst/dynwrap/run.R
15bc8822466c6d48a50f73427cdebacd *man/SCORPIUS-package.Rd
5cd11ce4e993f93f0162daf1a595912f *man/draw_trajectory_heatmap.Rd
d9f9a6ccbb839872a5bb99eb570cfc41 *man/draw_trajectory_plot.Rd
9c3b29be8ca27997f953aa6fed8db7cf *man/extract_modules.Rd
d01d88b750a8727515ff9e6552c052ee *man/figures/README_infer_trajectory-1.png
a423b3b0977ff7e3f5a54cef5d73dd94 *man/figures/README_moduled_tafs-1.png
d38c88d163222b2a21291334cc41f023 *man/figures/README_reduce_dimensionality-1.png
6f1c7854bf933406ddbf6de8313b1275 *man/figures/README_visualise_tafs-1.png
e9b6e9d2527a523f5558176b71918fd8 *man/gene_importances.Rd
253342ecc71327deff6689041b8de0a3 *man/generate_dataset.Rd
ba87bd6fc7f94f0185c882d830a2e15c *man/ginhoux.Rd
dfabd167f7ff582b345fbb009e055dfa *man/infer_initial_trajectory.Rd
bb416841d6bbfaef562e3f0d1a70c2db *man/infer_trajectory.Rd
9752f76ad39f52d358efdd333a82dfd2 *man/reduce_dimensionality.Rd
30e654062ffb1cf588c51240c2b58a35 *man/reexports.Rd
13f43f95a78f020248ec4a4550b01714 *man/reverse_trajectory.Rd
1f8e9b51bbe4fcd147f83bb196fd492a *man/ti_scorpius.Rd
f30e9e565bf303024ac6199516a25a96 *man/ti_scorpius_run_fun.Rd
1c338a94cafdfebbdf03b4b6696b8d48 *tests/testthat.R
276a19b256538cad18a3cfc465f072ac *tests/testthat/test-data.R
52954f7529ea5c42f6f119681dfcf729 *tests/testthat/test-dimensionality_reduction.R
0cd7ab7adc02c603b31021751a43843a *tests/testthat/test-extract_modules.R
c7342997c645f4a1201e6997b3783d5b *tests/testthat/test-gene_importances.R
77a519a537a6ef6815d72b3bb4fe5721 *tests/testthat/test-scaling.R
89afdff50bc3d74aff13f34ae2a85b04 *tests/testthat/test-sparse.R
1b55d9ce933c1f9b7763fff4eef2d371 *tests/testthat/test-trajectory_inference.R
184abad7127b1ba0a711128a7656209b *vignettes/ginhoux.Rmd
dcbecfef9a8458acc7101c5c6b37cbf8 *vignettes/seurat.html.asis
3d792e877a2c5832d1f35d04c8095183 *vignettes/simulated-data.Rmd
