ca796d40e582de43dda1754a79c7189a *DESCRIPTION
c252186009f9c479270d34b55849521b *NAMESPACE
0eb79eb78819557455c74b01430627d1 *R/data.R
308e1f92d20c72d05dde540a5b2b97ed *R/dimensionality_reduction.R
be3399cbe2cf3e2af4b5bea1a512f3bb *R/distance_functions.R
d03a4e4142adbd290d8bd119d1fd0a5b *R/dummy_proofing.R
3709679465ca5093cee23226622b01b8 *R/evaluation.R
9529d903ecc4642b89bd23a66d39f44a *R/extract_modules.R
04db1fa61f8411ffbdcde36fae95aefc *R/gene_importances.R
55d8acb92ebd78da49022896d66ba307 *R/knn.R
153bd92bf9e917cf1c78daaa7321dee4 *R/package.R
cbe3f1c2819a75887de2479a8727eac4 *R/plotting.R
cd2a9d1fc36cb2e19ec16192d2a31e86 *R/scaling.R
f2f671615aa874e64bdecec55eee9436 *R/trajectory_inference.R
262fff584231f24e09e2f311e83f5833 *build/vignette.rds
e37f3b5959cb3801a4abc64967ecf3c4 *data/datalist
185be754adfcb71888fee9c4575e1253 *data/ginhoux.rda
da049c477262ca4a13f6e0baafcfd3cf *inst/CITATION
54fffbf0fe26601c53db315b27eb0374 *inst/NEWS
ed0db04003ef06e8fc2a6ab0a0634e18 *inst/doc/ginhoux.R
184abad7127b1ba0a711128a7656209b *inst/doc/ginhoux.Rmd
979c32c948820a6cb695d5149f3565cb *inst/doc/ginhoux.html
df2f71d0787a5312376d0ae5f1630c40 *inst/doc/simulated-data.R
3d792e877a2c5832d1f35d04c8095183 *inst/doc/simulated-data.Rmd
256dceff342e7ce530790dc36ce68126 *inst/doc/simulated-data.html
15bc8822466c6d48a50f73427cdebacd *man/SCORPIUS-package.Rd
0f83772eb24c33479f92210769dd9821 *man/deprecated.Rd
3dadbd0b50bd5b5616e277942113459a *man/distance.Rd
97572291216119f1ade2f1765c32a6b1 *man/draw_trajectory_heatmap.Rd
cef39b3028a37cd4cdc0dd0855af09b8 *man/draw_trajectory_plot.Rd
cfa20a9e79d7c58c485dbfa051a816d2 *man/extract_modules.Rd
42428784abc66387ea94353fe52aed70 *man/figures/README_infer_trajectory-1.png
e9015be4c46660baa7a0d5ee18b851e6 *man/figures/README_moduled_tafs-1.png
cb20739fd5f8022f867cd893b74607a0 *man/figures/README_reduce_dimensionality-1.png
46c97cde688bae2b4d330b89591a1f95 *man/figures/README_visualise_tafs-1.png
af8326b5bb214fbd5b83eaf7fdfcd51e *man/gene_importances.Rd
253342ecc71327deff6689041b8de0a3 *man/generate_dataset.Rd
ba87bd6fc7f94f0185c882d830a2e15c *man/ginhoux.Rd
9cc9adbc5475088cf40500092d5c67e5 *man/infer_initial_trajectory.Rd
32e80f5380419bc018f78a97c1835328 *man/infer_trajectory.Rd
d1c8d0a1d32b015f5de14f558eff848c *man/knn.Rd
aa98aae60cc0e6f1faa3e0ffedcd3af6 *man/knn_distances.Rd
49509e591674f51dd38be7f7021a931a *man/reduce_dimensionality.Rd
d594725d95b81ab8042d38038a78ee1d *man/reexports.Rd
13f43f95a78f020248ec4a4550b01714 *man/reverse_trajectory.Rd
1c338a94cafdfebbdf03b4b6696b8d48 *tests/testthat.R
276a19b256538cad18a3cfc465f072ac *tests/testthat/test-data.R
02af030b7c6af7ff08e714167f060b0f *tests/testthat/test-dimensionality_reduction.R
0cd7ab7adc02c603b31021751a43843a *tests/testthat/test-extract_modules.R
c7342997c645f4a1201e6997b3783d5b *tests/testthat/test-gene_importances.R
4c48f6a0798d8d837e50563c13af87bd *tests/testthat/test-knn.R
77a519a537a6ef6815d72b3bb4fe5721 *tests/testthat/test-scaling.R
1b55d9ce933c1f9b7763fff4eef2d371 *tests/testthat/test-trajectory_inference.R
184abad7127b1ba0a711128a7656209b *vignettes/ginhoux.Rmd
3d792e877a2c5832d1f35d04c8095183 *vignettes/simulated-data.Rmd
