92e2818420feb749055fb4b065e97c9c *DESCRIPTION
b757b6ddf370a6d45b2fcfa4b9f58114 *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
1bf8e451ca5510fc36c23bea0c7d6150 *R/AuxFunctions.R
e75c95aad07293255a8845dc936a1d11 *R/PMatrixClass.R
e7961d97ba052cf604a7cb8c97d83f9f *R/discoversomaticInteractions.R
efb89caceafbfe421a5732c2daeef699 *R/getMutex.R
e18be305043985b0039d8577618f9c9d *R/getMutexAB.R
32d307d997152315f264b3803e2e04cb *R/getMutexGroup.R
933a820434644ad9317b0ca85be59047 *R/getPM.R
8d9f01bb89e6f5195b07945f3b131684 *README.md
39e1e8c87c5b1c28691e99687087d44a *build/vignette.rds
922c1716b2d8563a736ca3f5ccc6f611 *data/AMP_COAD.rda
efbd0cfefdff70d714be50072f9f5725 *data/A_Matrix.rda
db0fde74fe10f66ca7342f967edf2ba3 *data/A_example.rda
7fcbefdfc9ae52be9dde4a1ddbda02d6 *data/B_Matrix.rda
7c781b77d87fbcf9eac1f1176f02148e *data/B_example.rda
fc07ef94a7e5f8d54f01981902bf6b42 *data/PM_AMP_COAD.rda
121c56128a6fba2b8a980731e48689d5 *data/PM_COAD.rda
e7af1f5cf8a68d70ed5f697209e31fae *data/PM_TCGA_COAD_AMP.rda
aef8f1b8ed8d3b1e2f1eff08669e3cc0 *data/TCGA_COAD.rda
f60c7b4dba263f256764374cf6f28016 *data/TCGA_COAD_AMP.rda
882645569df271274e72e241c2223d20 *inst/CITATION
c7f4454b84c86a968590b602fe3589e6 *inst/doc/Rediscover.R
2495f03806caf676d4adaf82f1d3ce24 *inst/doc/Rediscover.Rmd
b3ad0f5880d577d2a0efaa8425b0d6d8 *inst/doc/Rediscover.html
d69db0f5896950609658486e7c0e3b2b *inst/unitTests/test_discoversomaticInteractions.R
b4f42bcaca3eefce8566cb989adbfbf0 *inst/unitTests/test_getMutex.R
e3c4215ac05f0f252128971ec630387e *inst/unitTests/test_getMutexAB.R
bc21b2874ba66249413feeaf98e76dfc *inst/unitTests/test_getMutexGroup.R
8873e902b6e0cd69c1eb8ec513b5d9c4 *inst/unitTests/test_getPM.R
07ee1c185c807bef8fb33d4f392b62bd *man/AMP_COAD.Rd
aba7ce98466111ea9190cb24a041f40c *man/A_Matrix.Rd
5f1935d398fb87960debe1aa31598193 *man/A_example.Rd
2439f8fd1d253c4d4b95fd6cf308195d *man/B_Matrix.Rd
511a527dfaadecca60929c5f2a5f4c8e *man/B_example.Rd
57896aa046ebb3af4d0f0240e287e6c5 *man/InternalFunctions.Rd
7dd81427fd72e695837e72ec450148dc *man/PM_AMP_COAD.Rd
ebd01e34b59672707100af5641437b99 *man/PM_COAD.Rd
a1d0df9dfe214d4c20017d55d0e4f5ef *man/PM_TCGA_COAD_AMP.Rd
191a19886c695a307becd8bbb5952443 *man/PMatrix-class.Rd
08a65d9bbf22e49f619c5e0220085053 *man/TCGA_COAD.Rd
af654510d4d35710048ff8bcfc46cacf *man/TCGA_COAD_AMP.Rd
7964a581a4bafeeadafb9eda4f9ba1b6 *man/discoversomaticInteractions.Rd
0805e9fc224863fa5bdfe592d4fb60db *man/getMutex.Rd
5809a0e5f07d5d16a43db1e9eb20727f *man/getMutexAB.Rd
de483f8f1f6a4aad69f38621e6749a30 *man/getMutexGroup.Rd
33e5d3c61694f289392c0d2567d25263 *man/getPM.Rd
7bb83f45fdcc62b5df8d6e372a906732 *tests/runTests.R
2495f03806caf676d4adaf82f1d3ce24 *vignettes/Rediscover.Rmd
8db0972cdb406680a6f36cc898df3b2e *vignettes/coad_discoversomaticInteractions.png
fcf82d451b02591ab09db86b52b14abf *vignettes/coad_oncoplot.png
e55463567c5836472536df59e7e4f3df *vignettes/coad_somaticInteractions.png
e1dff25fc6e0cb9d6ef619d810edb0b4 *vignettes/flowchart.png
