eeceff25bc3bd7dacf168fe6e61719f1 *DESCRIPTION
3b9cf11e7e752a421624418b92ecdbc6 *NAMESPACE
c8ae609cc1b79b526d00d3ac3513ee3c *NEWS
e420a09169f5f1fdd0a20afacd7cc711 *R/CSEGriskfigure.R
05b473278c51a51cfc41f75916fc886b *R/CSEGtmufigure.R
aab6897b78f08ebbca949401b44e5069 *R/MARSS.R
1a10cc8b11916401b68abb1dba6457a7 *R/MARSSLLprofile.R
a908125fd824888ff28565fa21d7d847 *R/MARSSaic.R
53076ca617ac6d5ca108d8cd7a43cc17 *R/MARSSapplynames.R
8dda68b8c64990b71f2ec009364a68aa *R/MARSSboot.R
ed5606836a06a20fb372e87fe5ecad05 *R/MARSScheckdims.R
4c0cd790bb5170513d7b1f4571183e93 *R/MARSScheckpar.R
309ba07c00f44d159d74166ca0bf9fa8 *R/MARSShatyt.r
a03b4379a55c0d000605040fb6709a71 *R/MARSShessian.R
d4c8209de796bf0ffcef8215ac966d78 *R/MARSSinits.R
5727f1e915c8b161aab27ecc1729ba32 *R/MARSSinnovationsboot.R
89f4d3b5761da207ecfb8a559ab2676a *R/MARSSkem.r
2afe41b6ee677a2bf6ce8b0d4af962d3 *R/MARSSkemcheck.r
bfaff2354924c856977050e9b75a9910 *R/MARSSkf.R
07a46af166ebbd5202d833edf1dea45c *R/MARSSkfas.r
7b4e0532825b01a7366ed9cb6ee92cf4 *R/MARSSmcinit.R
fd4e75f5faf1acd1180a46811dd5dc16 *R/MARSSoptim.r
1fded6c04aba01924c02a884c8797dd0 *R/MARSSoptions.R
63bb4c1f17ed324f7b252765cbdae2cf *R/MARSSparamCIs.R
d0d591716bb809c7c9e4ca6c7bb56063 *R/MARSSresids.R
b71fd3d8829fcab59d8feb4eb5f978c9 *R/MARSSsettings.R
41e641cfc4730f3a77631d3851de60fc *R/MARSSsimulate.R
0311fe52dd3ca49f3c995cb8b6e98438 *R/MARSSvectorizeparam.R
aea153532a1ad7c2686783db6f51215b *R/as_marssm.R
8ff82a86313be3593eab0b7cbc61a6e0 *R/checkPopWrap.R
0d3f73735b019e5a3b0385a58508b314 *R/describe_marssm.R
5bc8cf1130d5e065b2ab4680fde9fb36 *R/diaghelpers.r
05d9b1e9bda80317ac3f86b38988fd92 *R/is_marssMLE.r
44b5f0f8947edf1a62df02124f1f684a *R/is_marssm.R
f6529e09cc055e27a58ba01f44a46d55 *R/marssm.R
b0ca1193c3831e8d21ac25d19afd4ea8 *R/popWrap.R
c6f67d56f751f18dfe88a3044515cd3c *R/print_marssMLE.r
f67cac72537e86d9b2c95c87e9d7cca1 *R/print_marssm.R
bcd44db057d73e13e3b255048bdc0237 *R/progressBar.R
5a881953dcb5230077b9c10279aebf61 *R/summary_marssMLE.R
3a266a34931f3b65cd6839aa1917faab *R/summary_marssm.R
6a368bb265850d260a4ade1f5acc2ef0 *data/graywhales.rda
9687fd26d1c7e37deb713b5d15c39d84 *data/grouse.rda
c7d65bc0cf7feeb1e7966e1beacb9c95 *data/harborSeal.rda
4dbccc6fbad7f2d5e21cee4d4f9962a4 *data/harborSealWA.rda
624938a5457ce12a8a6c716ba0709b0d *data/harborSealnomiss.rda
4a7fa9d011e35e2a4fa23e999936fde7 *data/isleRoyal.rda
44dfeb873b423dfb8fced8bb73c1c7a5 *data/ivesDataByWeek.rda
54d4546697857f1217aafa15f4a93557 *data/ivesDataLP.rda
b221b6199191929a3e9a7308b024dff5 *data/kestrel.rda
55d5800c26a28e066254241de015be2e *data/lakeWAplankton.rda
3ac0630c867dd992eaa9e1a3629261fe *data/loggerhead.rda
7461688b324fce41b713db0d90dbc451 *data/loggerheadNoisy.rda
7dba40d4261dae2282fce64e7a4885ee *data/okanaganRedds.rda
9e1f016e8a44722b82c4537c7a4c8bb7 *data/prairiechicken.rda
59a0eba4833c80a67f0c0eb401578cb5 *data/rockfish.rda
ff1f8311cc96d406be8e6304e775d1ed *data/wilddogs.rda
4dd163a62011c425455113ee0b35503f *inst/doc/Case_study_1.R
8f8c15e58f654524b5e9c1cf9a578d58 *inst/doc/Case_study_2.R
4605db5449c02ab31d349cd0a8865cbd *inst/doc/Case_study_3.R
28914f83f63f2ac53dbd03035cb549b7 *inst/doc/Case_study_4.R
c1ec1355e9b2c2f3032f30eca962beda *inst/doc/Case_study_5.R
f9aa7a66066932364cb6b1a1a1223443 *inst/doc/Case_study_6.R
61160965f029a802debbc3c80a0e5ec3 *inst/doc/Case_study_7.R
c054013418f9080700d3e7c2ed33d532 *inst/doc/Case_study_8.R
bfbc81a659c002c0685ffa94681d778b *inst/doc/EMDerivation.Rnw
f7a10d2f84bd9fe0b791617484135860 *inst/doc/EMDerivation.pdf
dbc03462133d59b7eab222a6ca78875d *inst/doc/Manual.bib
59383de741bdd7a59569b087f1239ccf *inst/doc/Manual.pdf
0387710c51cac5101c6c54ed94957ee5 *inst/doc/Quick_Start.Rnw
321655405263d094d25b9c12482cd514 *inst/doc/Quick_Start.pdf
65c85789e17c4bc7ca65e14119eb62a3 *inst/doc/UserGuide.Rnw
000df8bc3a57c99f4239ae31c46f2b9c *inst/doc/UserGuide.pdf
e280b0d268a2695dcb93308d97b21633 *inst/doc/index.html
1e92606a8ad60e4912b2e6e201cc4183 *man/CSEGriskfigure.Rd
de42e0a513558b7997989f374b13f049 *man/CSEGtmufigure.Rd
7551a72f42233a6dc448a7e364b9533c *man/MARSS-package.Rd
258ce7e3a1669425ca2ca6579378ba81 *man/MARSS.Rd
35490a1930f2e3e6fbf1f3adb844baf9 *man/MARSSLLprofile.Rd
8a219d6a4ac6c59683f430c7fdcb441c *man/MARSSaic.Rd
0aa8ad347d358e6df460d0d6edf34183 *man/MARSSapplynames.Rd
73dd0c75d0769a54a7156bc8be2cf2d2 *man/MARSSboot.Rd
9456bb735c7a55f5c1469fe1787535ab *man/MARSScheckdims.Rd
8f049f4e339d3751eae99e32e9ce3824 *man/MARSShatyt.Rd
29e6f4dffef44cd4aa27ad2e2b331e38 *man/MARSShessian.Rd
27091c1507f6cbb71de91fad2591bf4a *man/MARSSinits.Rd
dce3bf49cc57dde025cd0da93a950fa7 *man/MARSSinnovationsboot.Rd
7a27c01abd0b608252f442c5cb8f7c20 *man/MARSSkem.Rd
73e600267c6e104909d90c1fb3645eb2 *man/MARSSkemcheck.Rd
acf8162f25c07b5a4785d7fd8e084b18 *man/MARSSkf.Rd
5ac7673642c54318d947429ba5c514af *man/MARSSmcinit.Rd
2fe896831c398564e50a562c0bff629d *man/MARSSoptim.Rd
bfc7a3acffcc09796312e16e24579ae3 *man/MARSSoptions.Rd
5dec7512ee3c5d44da8457f6789ff811 *man/MARSSparamCIs.Rd
279afc20110fe25d196ba14993af03be *man/MARSSresids.Rd
0356e930d292b899289a1f47910806ca *man/MARSSsimulate.Rd
8f94150147fd269ed05619c6b963b378 *man/MARSSvectorizeparam.Rd
698ca05c69686137f29e6d299c43c1dd *man/allowed.rd
c6402a5aba2d22f1ade10fb2483bae3b *man/checkPopWrap.Rd
2cb1246431f2a43a1279836696d71a9a *man/graywhales.Rd
3aac2982ab3eef3277f155210ef390fe *man/harborSeal.Rd
be3f07734bf7783cfcaf8ebf5dd933cd *man/is.blockdiag.Rd
c6274c696c869026ec5f43c8d612aa81 *man/is.marssMLE.Rd
dd05835eecaad502393b11f6082d3136 *man/loggerhead.Rd
7bf1d84787ad1f2f0278aba4240c343a *man/marssMLE-class.Rd
3d0e5272da417ccc7de4a4901b46e495 *man/marssm-class.Rd
20d6a8fe8fe70f50da276ac01fc09596 *man/marssm.Rd
e9c5280a2110a26bb5234bd3ba32246f *man/plankton.Rd
4796b2d49cf0c5c73d9169e5119da0fd *man/popWrap-class.Rd
3100e03e0497c809ed3393e408b65c89 *man/popWrap.Rd
b70461ab1fb57918df6b6a8eba3b134a *man/stdInnov.Rd
