2b3d31cafabdc4fd4730b69527b5ade7 *DESCRIPTION
75de0fe6613c0cb7267d4115dec0159f *LICENSE
80651775e65b2e59f64a579ff91f459c *NAMESPACE
c3d71215cc54ea4c2694bc13c4f31fef *R/RcppExports.R
9681830bca9f9ba2be34161897b5e659 *R/data.R
e89e20e0289153fdff56395cb15b6c78 *R/helpers.R
89ba50c12b7abfaab0b2b8414f4730ab *R/utils.R
1ea50d3a7a7a6b775867706b46bb679c *README.md
8acc997e4bcf207de77c5b42f5abfbd3 *build/vignette.rds
4ffaa2ee75baea64b9069037046f05f6 *data/Evers_CRISPRn_RT112.rda
606faf9f32351f73e2ab63545d51f9d7 *data/Sanson_CRISPRn_A375.rda
8b84e8386514cad52008a5d9bd554ba5 *data/datalist
fb838e28aa600b4b90631741266269fb *inst/doc/cb2-tutorial.R
d4e9606185b0413c5fbec268db33f92b *inst/doc/cb2-tutorial.Rmd
1be354f76d95ca9043c7acf0e64c5ec4 *inst/doc/cb2-tutorial.html
7caa3925001fcd5b96b0005003547eaf *inst/extdata/toydata/Base1.fastq
6cf0a8ac82eae578e9d51c162cafe613 *inst/extdata/toydata/Base2.fastq
1f18ec364a0e9cd12293a8cc61046188 *inst/extdata/toydata/High1.fastq
f38f7584d527b80fba902f050cf28588 *inst/extdata/toydata/High2.fastq
5bd8c3a850f938fc81165ecbaca4abb5 *inst/extdata/toydata/Low1.fastq
fc3b83b4506f3d7b1bb9f052902e94ec *inst/extdata/toydata/Low2.fastq
ac57ee2d93bc9d8ff564c5dbbc3cef47 *inst/extdata/toydata/small_sample.fasta
2498bbf3835e2a6a191181d590b74445 *man/Evers_CRISPRn_RT112.Rd
483672e84265fafc39a3147cb15b6d27 *man/Sanson_CRISPRn_A375.Rd
7c70e3848507b2e9facadcb244701739 *man/calc_mappability.Rd
4effad862ee930776564210caa832b64 *man/fit_ab.Rd
6043f53bf593e84fa5f8b79a4a0e9618 *man/get_CPM.Rd
11db3f97ec0f7dfdf68bd069aceaf6db *man/join_count_and_design.Rd
972635ca065921f9a726e0a1b6f3984f *man/measure_gene_stats.Rd
0c4071e4abb8f23ca51d02b19f60a567 *man/plot_PCA.Rd
174fb81a4990dfdda14e44eb8ea7162a *man/plot_corr_heatmap.Rd
db510ff54ab2f3296243a91a11891438 *man/plot_count_distribution.Rd
96d9534d61d4da07e5a2123729723b48 *man/plot_dotplot.Rd
f2f40befeee9ffca4b5113cf249d03b0 *man/quant.Rd
d715fea24ef8b57aab6e076825380257 *man/run_estimation.Rd
9600d42b31ccc614e4589f643a3538ee *man/run_sgrna_quant.Rd
5743cf556050a51f74260a3a8b4048db *src/AdaptiveHash.h
818c0120bae12094a5bb7c85f6ebbe02 *src/CB2.cpp
932d9c1eedd4f4b0e54aea23acf798c7 *src/Makevars
932d9c1eedd4f4b0e54aea23acf798c7 *src/Makevars.win
839cfc899d1b16c8987b9a99428153b8 *src/RcppExports.cpp
3c76a7a8babb4b4526c2bf87bc41ff88 *tests/testthat.R
30c316362077e634be118f139dec5381 *tests/testthat/test.toydata.R
d4e9606185b0413c5fbec268db33f92b *vignettes/cb2-tutorial.Rmd
