86ee55d4c569f59f711e87bb143ed803 *DESCRIPTION
38219c8734bcf4c0ddbd2f750a51b26e *NAMESPACE
adf4b28806313d104b763e510e258158 *R/as.dframe.R
b5d39b5024f58cc2e768b99bb50377c5 *R/cbindFiles.R
a07d168ab0b48159df17dacb1a1c5456 *R/coef.haplin.R
b96703c7a3784e4cc12b67a193d472f1 *R/coef.haptable.R
8ede8d2794a5083d089d7188ac8ea6d5 *R/coef.tri.glm.R
1050650cbf86ea51585eb2c771db3489 *R/convertPed.R
212cb8a330951692bb9cca21a35aa5e0 *R/dframe.R
b307d916b5a9d4d39176b31ab561ee86 *R/dumpTab.R
014f7de5a18b9741460d19f570a0e7cb *R/f.EM.missing.R
f1d97555501cff0ef5013b0137d84519 *R/f.HWE.R
581fb8a8acfbe627c0f104c1eb165908 *R/f.HWE.design.R
6170ba4c845e98920db93fd3ad7ca973 *R/f.QQconf.R
a54784444a32b83f0189c9fe4761161f *R/f.Rplot.R
a23d12db0c35b81a5d42d736f92444f0 *R/f.aggregate.R
c099b79bc3a709026e521a24fbf8f6d4 *R/f.args.from.info.R
1fa9cd7d09cd8d3408bf536eafa7b1fe *R/f.bdiag.R
205f0f51c40700a177f4dae2646a0f4a *R/f.catch.R
5756a7df2c3eef58ab047cab7bafee19 *R/f.check.pars.R
1ef378ea9655ff0f05d31098b233f04b *R/f.coefnames.R
4990afdcf0af69a6bd390dbc1cb7f054 *R/f.compute.effects.R
76362a661b6810b9b64daf390e011785 *R/f.create.tag.R
268278949d2c6afbd048f71c01cb6546 *R/f.data.R
ac0f90c45f4817d1b5d04bec30eccf8f *R/f.data.ready.R
a43ef1bdba57ae103ab145e04f824f62 *R/f.debug.pvalues.R
6a1f96a968e85591636075c63221ccdd *R/f.fill.effects.R
ffa1571594cdf69e16f7476439cf10ea *R/f.final.loglike.R
e901704c339b5b074dfd220a8c71834f *R/f.get.data.R
dad071c4699b6f707d2c0cd48d87bcf8 *R/f.get.marker.names.R
2eb0c3c538b5e30c8a405876ca9093e6 *R/f.groupsum.R
8f074bb5ee197511fed1b74bd17953fb *R/f.haptable.list.R
a38b0d268abdc0d91f07bd2f587b00bc *R/f.jackknife.R
e51e533b5e7a1440b35397c61786cada *R/f.like.ratio.R
2c4ea2918c171558566c2e25a461e8c4 *R/f.make.design.R
cd5b08c5ba0a51bbe09cb2c635175ab3 *R/f.make.index.R
1dcc2f1c473f6eeac6486629ea084582 *R/f.matrix.to.list.R
a4253990ea263c71cdd6afdb9c09ad7d *R/f.ped.to.mfc.R
97fb176a7ef4fdea18ccfaee918cf83f *R/f.plot.effects.R
e8d263e083b68989410c2a7b305a67b8 *R/f.pos.in.grid.R
0e112a0ed7a73d8d55d978c5f19c5370 *R/f.pos.match.R
e61adce10c75a27d19436164261e5b40 *R/f.pos.to.haplocomb.R
2ced4f5f20f91dc00e8ae53c49115718 *R/f.post.chisq.R
da9dda87d3319580099934ef757c6b8f *R/f.post.contrasts.R
83211ffab3973b9d86a20e3c51b7ddbf *R/f.post.diff.R
7251c43180fc489c728bfb562792879c *R/f.post.poo.diff.R
fc17358b33e7db10786843195a079742 *R/f.posttest.R
e13a0266e7cdfa0d1f05947adc058656 *R/f.posttest.score.R
1064b275c9eed33e0575379480ce528d *R/f.preliminary.freq.R
0bd8dd21970789c18aa7ded4e79281ba *R/f.prep.data.R
21c065f4057ded717209b512a2972caf *R/f.prep.dataout.R
5426c4fb736868bcd359bb8efc1ef3af *R/f.prep.reference.R
c74714a5aa0e0fb89536a0ea635f4cc4 *R/f.printlist.R
75e699ced6de3e0496fc6641dc0ec17d *R/f.prob.R
728dc7b8abe4c9331d93ae948fac6b1b *R/f.rand.geno.R
23e93cdd151de35bacbebd741daf016a *R/f.read.data.R
366df6b6525898e8c9e770e8cc8b2137 *R/f.redistribute.R
da9d40ffd50332941abb75e52ee39455 *R/f.repl.thin.R
b9337bf8b776514ff63b024954544538 *R/f.scoretest.R
cb68a7714da724c7ee090282ca21aab6 *R/f.sel.haplos.R
5cbf34a659dfef536680921aa2c25370 *R/f.sel.markers.R
6754f1e16add24e6db797749190dd3b8 *R/f.sep.data.R
843c61402ce21c7902a2fa2958eb03ea *R/f.sim.R
84ef877950e0c1f4a6c483fdfc1783e4 *R/f.sort.alleles.R
b64799d46938972522fd170099ef606f *R/f.sort.alleles.cc.R
81ca52234f7628bb1078cf25050966a1 *R/f.split.matrix.R
989780e1016a1390a2a153c9e5857fd8 *R/f.split.vector.R
e68bc5875304c03b40b93268a8bb202a *R/f.suest.R
af795484ade8021673639b0bbaf4474e *R/f.tri.glm.R
a3e69ab1270b955e94a6c374512d8450 *R/f.var.covar.R
4fe19914e590af4ea691596c3b9f76c1 *R/f.vis.R
2a17c0693dfd5a6ae537110b107ad870 *R/f.windows.R
c37d356ff6fbdf4cc6935aa48e753bf8 *R/gwaaToHaplin.R
2222404c90bccb80218ebae46592d6b5 *R/haplin.R
4b28fa4515f84cf97db33adceeaeeb70 *R/haplinSlide.R
947d987fbe2b0e3f4ba1e577a898f9b9 *R/haplinStrat.R
b17e1640cebe1ff3fc2189908e6e58ae *R/haptable.R
5ddb177aacbd128a592b9d93196ff7b7 *R/haptable.default.R
932d06313acb5546f60f18d2918e4700 *R/haptable.haplin.R
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ade74c32ffabcba60e8675885992287d *R/haptable.haplinStrat.R
5e36bacf5707fe2172f67e1a436d6529 *R/lineByLine.R
a77e6bf7450619267209c88a34dafd5f *R/lineConvert.R
7a07adb37ff836238f050dd902267fa4 *R/output.R
67c549d2a2d9a44f20651b01026d7935 *R/pQQ.R
d671ee4362fbe91ecbe2d0e33b102554 *R/pedToHaplin.R
5aa2abe1eebb59fd8c2c9382f0cce7f9 *R/plot.haplin.R
13e52f6c62fb5d116a4155ff838614b1 *R/plot.haptable.R
caec41b03a7f55127c0bbb49ac35c45b *R/postTest.R
38fcd78326722e00e455085838bd11d0 *R/prepPed.R
88beda7affb0862a836e15a2bbd0d99e *R/print.HWE.test.R
f11812c4c474681eba511ee55d08e1ca *R/print.haplin.R
e1654eb0f463ec23fafc311e148d1f35 *R/print.haplinSlide.R
3c3e2474d57fceaea396adb7963395d6 *R/print.haplinStrat.R
c2415b9c7fb5d329e514e76210a162fa *R/print.info.R
3e8f8f53e816c6eb7496279f55194b4d *R/print.suest.R
fdb41c4f851e9107033218ccef1b4d12 *R/print.summary.haplin.R
32be805975d01bf12e6f7edba65e4857 *R/print.summary.tri.glm.R
45a5d5213925cc951cf82f21293e7e0f *R/print.tri.glm.R
af7bc84e516086ac7ccfb78ec7a6f71d *R/rbindFiles.R
4a8cb1e2d2a32b0cbf5487f97814d001 *R/readData.R
771cabb882ce1187fc1b579948f9a2d2 *R/snpPos.R
c969eb6c071c7eed13aa1f018d9ebdf9 *R/snpPower.R
b569685ac66e96388a0127bcc040698e *R/snpSampleSize.R
f2e8459803d99d92045f20b6eb947dd5 *R/suest.R
2b26b468a76469ad7f8a267171c4494e *R/summary.haplin.R
c88df50ed240272ed5d1b793124f0449 *R/summary.haplinStrat.R
8e8a0e2c3c8883e55503e46fdc7ea6eb *R/summary.tri.glm.R
6157bd592e940da6e29fa70f1c2899a9 *R/tdt.R
a9e2694040ced0fe7a84d7d35e2b9c50 *R/textlabel.R
f3bfcb53b7047a2aeb1c3b0d5959d878 *R/toDataFrame.R
8f09a81bfc1188eaa2189230c252cb40 *R/uniqueID.R
0ad886d9b2fa559647b7ab95099199ca *inst/doc/Haplin_data_format.pdf
04c0f9ad0802253c3055c9e508580465 *inst/doc/index.html
6b87cdc1d2be08a9aa45b8ac3b3acd98 *man/cbindFiles.Rd
fff1e8eee6f2da7272293c46cce6db6d *man/convertPed.Rd
c8eadea48c7aa0355c855306bed4c811 *man/gwaaToHaplin.Rd
204a65070a451dfde13f6a5e2d91ea9e *man/haplin.Rd
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8303d28bc6ade8f3fa5653b53106beb4 *man/haplinTDT.Rd
1ab68ffe33f5380080d14c4851d92d45 *man/haptable.Rd
98103adbae6cd82b3e0c5a2f4598818c *man/lineByLine.Rd
8c0f733611fe33c1ac248885dc9713d2 *man/output.Rd
b626a1c504129e26519678826acf3d5d *man/pQQ.Rd
27540918a263f54a8f77a8898deec54d *man/pedToHaplin.Rd
4b477fc176393a1a81e03d408c35dec3 *man/plot.haplin.Rd
77260aa4af0e488e5ee252921e88722c *man/plot.haplinTDT.Rd
2dd4748e520ba7d3711f57066e39bc39 *man/plot.haptable.Rd
afdd5e923af3ecfd2ccce7f1b6cced7b *man/prepPed.Rd
02215d4f977b74f3b879224a23416584 *man/print.haplin.Rd
b101cb292afe0cdc1c67341c1eccdb8b *man/print.summary.haplin.Rd
6b6dd2a40e4de90d07744d7bbcf02292 *man/rbindFiles.Rd
43bdb1760996fbffeabfdb6a9209801c *man/snpPos.Rd
b234350f09a92411c215f62b02d79ae8 *man/snpPower.Rd
c4b9330ca1c74e14f409f14377a9fcaa *man/snpSampleSize.Rd
a8364dec34246cf4237ca2b61362c12a *man/suest.Rd
facb541c40b514717c73a3796535defd *man/summary.haplin.Rd
af59539e88005424226e250551c0637c *man/summary.haplinTDT.Rd
fe453cbbebc70fa349d22960c901e486 *man/toDataFrame.Rd
