c36fb351ed724cc540d87698c80d66d3 *ChangeLog
caec5f0ce695637e5e03934f7fe984cd *DESCRIPTION
6bb1f52af43eb434668380217cc8f1ca *NAMESPACE
ccff35a2bb9318611d2611937f5ffdca *NEWS
01cd59178835cd46e735c9e35f0e545d *R/refGenome.r
6f959c1edd65a7582e1e142be5373ec4 *build/vignette.rds
c2673bb1cf8d6f38a89ab77e3321a875 *inst/doc/refGenome.R
6ac1225489029e9ced62f1243f52e545 *inst/doc/refGenome.Rnw
8bab3cfa3b7e7b9adb1d8a535b8950fa *inst/doc/refGenome.pdf
14e45949c7b783fc1985e2330ee04542 *inst/extdata/hs.ensembl.62.small.RData
bf447428806b7c2f0412d088185561be *inst/extdata/hs.ensembl.62.small.gtf
46d1f6e0df819f75652989cf95eeba05 *inst/extdata/hs.ensembl.76.small.gtf
4586ebac3dc57cac8e4babb48e90d4c4 *inst/extdata/hs.ucsc.small.RData
fe72fc088ebe634358b06cf969f3db7c *man/addIsCoding.Rd
a51f8783df605327afb2b360120c5a01 *man/ensemblGenome-class.Rd
858b3b26ee43fddc5d286ccf5080e26a *man/extractByGeneName.Rd
994f492933e0d4a61f72b33733bb39ed *man/getGenePositions.Rd
ea21d153712ec73cd08df1306e9ac041 *man/overlap.Rd
ed64f23d4e93ad6ffcc690a925f24f98 *man/overlapJuncs.Rd
0b890184b70b037bd7c9bd08df1d335b *man/refExons-class.Rd
2860e63ea6678e7faad838fcb8ff5022 *man/refGenome-class.Rd
5677e6afbafc0be8fef5c7a4687c5b64 *man/refGenome-package.Rd
84a3ac087403afb8792b18f6845e663d *man/refJunctions-class.Rd
a055b168fcbac2a824cf27c7f7ef8372 *man/saveGenome.Rd
05ce37fd61472e522c053d0308816277 *man/ucscGenome-class.Rd
4c9d2b01b7dc887bda6d620e0359f114 *man/unifyJuncs.Rd
81737543c591e43d48d79419e6761181 *man/writeDB.Rd
5c3c2f0e27527b64e19f3b71ea44ec8b *src/Makevars
5c3c2f0e27527b64e19f3b71ea44ec8b *src/Makevars.win
729a5938f6b70b21751b6c012c4d8e3b *src/ptr_pair_list.h
52ca816ff4595268763039132e95b8e8 *src/refGenome.c
62cdf0008d5bd5f2752d0e6ea14f31de *src/refGenome.h
c649d6b4d5a73c73a25605ce1e39f9e9 *tests/test-all.R
05bf58d34d6a1e19d49c984fba6e8673 *tests/test_overlap_juncs.r
bd1413a19c26237b941b0dde46fc2e8b *tests/test_read_gtf.r
6ac1225489029e9ced62f1243f52e545 *vignettes/refGenome.Rnw
