4eee098ff1f0f544a6b76fffa3e09daf *ChangeLog
cd67655424492aed6e28c879ada9f433 *DESCRIPTION
e24f0b5837f575abb09bfdb4ceb353e7 *NAMESPACE
c2f79e765e6daf06259f3110c774e967 *R/gbd_dmat.r
8aac2d246a93a7a4425e524736b11a22 *R/load_balance.r
fd698977365b62f444f75f05dea907d1 *R/mpi_example.r
5f9a595e5fa1cede747dfecf07f7ee0e *R/ncvar_2d.r
431c08f2c21931975487446cc78d1b6f *R/pbdDEMO-package.r
0900e1e78f646b7bc78476ab3b82d585 *R/plot_dmat.r
de4f3f2d5c08994d3adf46a8433b5106 *R/read_csv.r
22c2cbb98b660b6c3ded8ad134857ab2 *R/timer.R
7605d3edfe491db5c8b6be34f32d748f *R/treft.r
d80f3bc67125cd7c3fd5a313c393a58f *R/verify.R
1f5b4d2ae6afd082b1d6e1954ce459a4 *R/zzz.R
f7c297dd44e7931b39dc9bf9d5a9ccd2 *README.md
2598cff5a72348ef6f4e0bdf6a49e296 *cleanup
0cb73cb73f9a6eff76d86440a9155700 *data/TREFHT.rda
ce11f122cd77e7153d1607d1ebe05d30 *data/datalist
7f4f3984eb55188a40c3291026bdc44a *demo/00Index
7558441c03494ad2c4495c55615337dd *demo/balance.r
fed2536c8c980faf0f93ea5654203df9 *demo/binning.r
4e06f1c2cc7d81c4555197122e0fe6af *demo/comparators.r
59f2048bc820d18146a2064fa3f1e38b *demo/dist_iris.r
de55ce32a6d649ec6714704412cfe1c2 *demo/dist_pony.r
9c261cc4e7e1d2ff6ca3fa5d06d46b0b *demo/gbd_dmat.r
f83ec744aa2d0fea7847b4962622f4b3 *demo/iris_dmat.r
9691489a90dbcd794d817cd11c6081d3 *demo/iris_gbd.r
0ad678ad02ea3c2d459904a02112812c *demo/iris_overlap.r
472a2603cd75eed15a2b85ad345b35f4 *demo/iris_serial.r
5849e4828d97cb1e120fe9da15d6c342 *demo/mcmc_galaxy.r
8a40ab44a328d27aa8ce2a71fac1ec86 *demo/mcmc_rjags.r
528b9efd90ba5ffab1f96cfe17dce887 *demo/monte_carlo.r
c95c20aca21c197aeef08ae1d177048b *demo/nc4_dmat.r
363ac2684f8cc1422aae09270c42da96 *demo/nc4_gbdc.r
4a36f2b77f99164d694331b595b4ed37 *demo/nc4_par_read_1d.r
e7a43613870c8511d73bd4363ce760ec *demo/nc4_par_read_2d.r
6fb0c2c79755af21165cb326fbb8022c *demo/nc4_par_write_1d.r
c01f0192df1e08840b2904b116ff5f02 *demo/nc4_par_write_2d.r
acda2f0875b66d4f1a282776c9ff53b8 *demo/nc4_parallel.r
e106f77494c369d50a6d9024e057f788 *demo/nc4_serial.r
23ee52c98ebebd889fb0f76a5187ee89 *demo/ols.r
ef4b9f46bda9288f7faf1927397f4618 *demo/ols_dmat.r
c200bb7692d05190ad149d58ef23f5c3 *demo/pca.r
d9961290b55553a230f999a5b4f1263d *demo/phyclust_bootstrap.r
9e8ccede35389338e7c64e06e9ccdefd *demo/quantile.r
515183d3a289299ed115b175f489d90a *demo/randmat_diag_global.r
b239a73481827c38ba381524cb0d9546 *demo/randmat_global.r
391d2df1bfc01ee4e1320e7f9480c992 *demo/randmat_local.r
c5d9483139dfe8febb6f6550e5dfbafb *demo/read_csv.r
54dfcef967876ecbc041c9bfed0a1cfc *demo/read_ncdf.r
6f10e6ecec84326282857c38ce0d03a1 *demo/reblock.r
27961248e02ad302dc4ba8c1c9f3c878 *demo/sample_stat.r
bd478525f8d98f985463234f5dd79af6 *demo/sample_stat_dmat.r
10912763e83fd532038184cf398c9d0a *demo/trefht.r
244e609fccf6916df98efcbfa9a81991 *demo/verify.r
7de999342360714e41047786ae1e377a *inst/Benchmarks/cov.r
f92ecf18eb535172fbf9a774152eff45 *inst/Benchmarks/lmfit.r
6245cd4ad16d447518953ca7ad4f4058 *inst/Benchmarks/pca.r
2beefa3c8aef1bc69ad5aa2701baed14 *inst/CITATION
59aec75a550dc7c9cfb240ddc9108698 *inst/doc/pbdDEMO-guide.Rnw
5840814fa76ca0623e5a9a8aa95f3f7e *inst/doc/pbdDEMO-guide.pdf
da6a67aa1c5a4730a6df3d2298095381 *inst/extra/data/x.csv
e74856d0ba51e301a8b63531e0b70a04 *inst/extra/data/x.nc
8c5ea7ff82066550f138d6ef213104cc *man/Temperature-at-Reference-Height.Rd
96c04748345bd57aec1a949fa0aad298 *man/gbd_dmat.Rd
7a0037b858a8dd3aaa3780f28835428b *man/load_balance.Rd
94a24d54b22201f39181f2a7ae673524 *man/mpi_example.Rd
e6e1ea8162f2cead96a63dc76a83e997 *man/ncvar.Rd
401aa81f6d1800ed3c1675b38b0e7650 *man/pbdDEMO-package.Rd
e2a681d2bde61e9615085256a6fb449e *man/plot_dmat.Rd
731eb393e029a650c64b1792090913b3 *man/read.csv.ddmatrix.Rd
127a78a2201b8cad536b02a52354fd95 *man/timer.Rd
a8e2ccb9d75b822615cfde0a6190ca2a *man/verify.Rd
cb63c3fe61f0afdc62b904a31a3d3826 *src/wc.c
4a7c8791f592791ca0118269adf1783d *vignettes/build_pdf.sh
e0562de8dd112ca2826ff2f9be1aa09d *vignettes/cover/build_cover.sh
77ba5160354276d5209f5f3412cdd8a9 *vignettes/cover/cover.pdf
a29462eb36e2b4d7d20f8a04dfb60f6b *vignettes/cover/cover.tex
927d31b24489951686faea8d8ec56c69 *vignettes/cover/cover_2.tex
1eb12736eaa369b32c65a0100c28b421 *vignettes/cover/cover_3.tex
8bf7479ef82ecf6991a0570d780f2637 *vignettes/cover/join2.png
59aec75a550dc7c9cfb240ddc9108698 *vignettes/pbdDEMO-guide.Rnw
9b4ef7677f2a6b703f1f919972547bf9 *vignettes/pbdDEMO-include/01-introduction.tex
bd2483658c421776e45c408f860c49d8 *vignettes/pbdDEMO-include/02-background.tex
3230a05cf48880aa76056e5139aa888d *vignettes/pbdDEMO-include/03-mpi.tex
4a25d188fd2fc4120c8f646b7b39671a *vignettes/pbdDEMO-include/04-statistics.tex
f9949cc92110f4befb6c6aa63f38decc *vignettes/pbdDEMO-include/05-dmat.tex
a80fa255d219efd71b7a54f5ab7c4d0e *vignettes/pbdDEMO-include/06-gen.tex
c44426540bd30ea5da7ad2de125f6655 *vignettes/pbdDEMO-include/07-dmat_basic.tex
ffa6d247316df1225e9ed15384a00fab *vignettes/pbdDEMO-include/08-dmat_stats.tex
f2b8af0d05b330d05685bc6ab3799d8c *vignettes/pbdDEMO-include/09-reading.tex
bb71bac9eb74ae12e0a789cd4210673e *vignettes/pbdDEMO-include/10-pbdNCDF4.tex
8b9d0e6a69bc18e8c66aa85d26adfffe *vignettes/pbdDEMO-include/11-redist.tex
a37da6d153a145a18ca52615c1211ee6 *vignettes/pbdDEMO-include/appendix.tex
fca42382beed84e173fb11c91a188952 *vignettes/pbdDEMO-include/applications/a1-logL.tex
3c00fe068eb8c7dbc02ae53775e0426b *vignettes/pbdDEMO-include/applications/a2-pmclust.tex
4473a8eb76ba3700e0802f8ea12879f9 *vignettes/pbdDEMO-include/applications/a3-phyclust.tex
157a690a084d128d375c2f605f067594 *vignettes/pbdDEMO-include/applications/a4-Bayes.tex
8d66602a8bbc4b40fd81563b7a71f821 *vignettes/pbdDEMO-include/applications/a5-pairwise.tex
6c25b6e31baf0aeac3871de9505889ee *vignettes/pbdDEMO-include/applications/b1-ts.tex
0adfc962efba9fe48ef7e2ebeb7db1b5 *vignettes/pbdDEMO-include/applications/c1-tbd.tex
2518f6af5cd7c0c4ee693e8ca1b72901 *vignettes/pbdDEMO-include/frontmatter/00-acknowledgement.tex
8191b3a89823a7d8f711d5bb1328c0f8 *vignettes/pbdDEMO-include/frontmatter/00-copyright.tex
93f18ac6288d162339b7efe8e04717b3 *vignettes/pbdDEMO-include/frontmatter/00-covernote.tex
d8cd8a5260ce2403a4259b8fd38b1677 *vignettes/pbdDEMO-include/frontmatter/00-foreword.tex
f79319cde4d7c873932a2234bbf40c40 *vignettes/pbdDEMO-include/frontmatter/00-preface.tex
3b8a6ccfd804310755b3766562b419e9 *vignettes/pbdDEMO-include/frontmatter/00-warn.tex
6f86d8969f4a3a98475c93ebed937f32 *vignettes/pbdDEMO-include/pbdDEMO.bib
970f06504f32d9274dfc5482b671b680 *vignettes/pbdDEMO-include/pics/Phylogeny_of_Retroviruses.png
455fa3051f81558768fb7bf0f11a4304 *vignettes/pbdDEMO-include/pics/bc.png
a70df2dde09737733de4870bd0da7c6e *vignettes/pbdDEMO-include/pics/block.png
b1f29e12499e1491cb0378b89ea93059 *vignettes/pbdDEMO-include/pics/colblock.png
94066af476289eb77ba4769b1a97c608 *vignettes/pbdDEMO-include/pics/colcyclic.png
f33fc79cbdfe40948a294df561c8aa30 *vignettes/pbdDEMO-include/pics/cov.pdf
62a1eb9876b317ab4311589238ff8d9e *vignettes/pbdDEMO-include/pics/dist_iris.pdf
0d228475b8c768b0badad7b420ccbd8b *vignettes/pbdDEMO-include/pics/dist_pony.pdf
58467f8454cfd260be7d0faf3769cb0d *vignettes/pbdDEMO-include/pics/dmat_block.PNG
f92857c10a74da6c3fc34a73a238da2b *vignettes/pbdDEMO-include/pics/dmat_block2d.png
5855b22d3b3f48475d989b424e8083a7 *vignettes/pbdDEMO-include/pics/dmat_blockcyclic.PNG
2d9d0becf350c4d38ba3ad6b1b2c3962 *vignettes/pbdDEMO-include/pics/dmat_blockcyclic2d.png
f356238bef5d97296cee9d6371b2dfe4 *vignettes/pbdDEMO-include/pics/dmat_cyclic.PNG
cb3f26d61a7e3b335418571d615c223d *vignettes/pbdDEMO-include/pics/dmat_cyclic2d.PNG
bb6cf0b7696d09962b6c31637776029f *vignettes/pbdDEMO-include/pics/dmat_plot.pdf
88db71e823c8a2a84c83dae89fdd11b7 *vignettes/pbdDEMO-include/pics/galaxy_1.pdf
00efcb99d5880c156aef9eef3a79694c *vignettes/pbdDEMO-include/pics/galaxy_2.pdf
ea21dfe5437d8ce9c1a65050c79574b1 *vignettes/pbdDEMO-include/pics/galaxy_mcmc.pdf
f56fb752de003ae2526a3cf805bce8f9 *vignettes/pbdDEMO-include/pics/galaxy_rjags.pdf
d8a759d4189601781c833a21ffc8964b *vignettes/pbdDEMO-include/pics/gbd_plot.pdf
efc6beeb4c13cde14ddeb8e7a32d9d50 *vignettes/pbdDEMO-include/pics/iris_pairs.pdf
d5666be1cdd032d282f4ee58b0fcab6f *vignettes/pbdDEMO-include/pics/libs.png
04e09d44cbc77fdf400e9361e81b8055 *vignettes/pbdDEMO-include/pics/misleading.pdf
df52da4a205d13dbc64ad2f5039f0ebc *vignettes/pbdDEMO-include/pics/parallelism_data.PNG
950aef32c299a142ebf355c132649481 *vignettes/pbdDEMO-include/pics/parallelism_task.PNG
400dc89be15457a7d5e6623eaf69df8d *vignettes/pbdDEMO-include/pics/pbdR-packages.png
d06bee04cdee342bd10f4073902811de *vignettes/pbdDEMO-include/pics/pbdR.png
8944c2c90189c3352dd12e821a5be3b6 *vignettes/pbdDEMO-include/pics/pony524.pdf
95b165973cd0965bf7a5f5c25c963af4 *vignettes/pbdDEMO-include/pics/rowblock.png
37fd119337a30d59844f1426d40c4e2f *vignettes/pbdDEMO-include/pics/rowcyclic.png
d67264db933f4ca11e3ecd5fcf4516e6 *vignettes/pbdDEMO-include/pics/serial_plot.pdf
dd814096aa6beae20d6db92aee80bca3 *vignettes/pbdDEMO-include/pics/trefht.jpg
c361b262c34785162574e5dcd1fc559b *vignettes/pbdDEMO-include/pics/uch_small.png
e6e18cfab1e79ff647c950acdd617e37 *vignettes/pbdDEMO-include/preamble.tex
e750acb71b2a897f38e43beedc9c14da *vignettes/pbdDEMO-include/sidelabels.tex
7884e658586ca4509733317589ed598c *vignettes/pbdDEMO-include/style.tex
53ef1c0bea5f5fa9ee79af274388edfe *vignettes/pbdDEMO-include/titlepage.tex
