c8635c02d6e293458c78a7cffc798572 *DESCRIPTION
9c091e289dd8911031b9f7aaa9bcee05 *LICENSE
7472f10b8a71676eb7f4d4988a4c7a58 *NAMESPACE
4696b993b8dd29866755ea8c3f320963 *NEWS.md
a4152444f75508f40a0a62cb76457fa4 *R/GaussianMixtureCalls.R
fa64b355eabe07654ddaed56df414a00 *R/clustering.R
3d819c9e9a807fa686b6547a3b29598e *R/copyNumberCalculation.R
99fbb03c55e6158d27dffee69fc0ccf0 *R/createTapestriExperiment.R
8a12731d0753d19cdc9d2e8bba78c615 *R/getChrOrder.R
f9373968c474bf63fef31091df36a9ec *R/getCytobands.R
b62bcc2d772f1bfc2291a59106b3db9d *R/helperFunctions.R
e6c79185da988a2215e7ac5d924565dc *R/karyotapR-package.R
cd46fa2b3e2e9b84b2510e1045d16259 *R/moveNonGenomeProbes.R
cb1c23c30f8d2adb37889d397d0c004b *R/normalization.R
1c5dd1fce6095b48aa03f9e8c3b30b9a *R/parseBarcodedReads.R
a6ca9f680be170540d4afeaaa28f4612 *R/plots.R
289f85d8250aa81f133b18caf90eeb26 *R/sysdata.rda
3a7af42759ea978d88b836ad8540e86c *R/tapestriExperimentDefinition.R
eae1c4b6363485cdb0bb238545cbbd52 *README.md
f9d2c18bd36848cebcf5147dc9410c8b *inst/WORDLIST
13a75cf2bc53dc4266428c41b21de665 *man/PCAKneePlot.Rd
20fcb22eed905b2708769092221f863d *man/TapestriExperiment-class.Rd
3dca1956dfc4286a700415010f8df01f *man/assayBoxPlot.Rd
31e2e670c980b5944f40be66140c1e48 *man/assayHeatmap.Rd
a261689a01d50b78b50f36727455cac2 *man/calcCopyNumber.Rd
29c3c7f68ac8ea5dffbe7f45ea486cc9 *man/calcGMMCopyNumber.Rd
3c8e2ea6fd76181578c922c4f40b10f2 *man/calcNormCounts.Rd
b6c0a9a7d973ec0bffbcf89c64ae115c *man/calcSmoothCopyNumber.Rd
c6332a1ebd84c8b8f1f06045a7f0cb8e *man/callSampleLables.Rd
c5b2dfd9d899c3627c2213619fc59a80 *man/corner.Rd
655f3ec2b1004d7cfb965efd97fd6b5d *man/countBarcodedReads.Rd
12fe4e94bdb939acdc1b025830d467b0 *man/createTapestriExperiment.Rd
7636478044d44a408971773cb4d87b0f *man/figures/README-boxplot-1.png
a64dc307193839e3c8f841e4b7d15c08 *man/figures/README-heatmaps1-1.png
f1759c98854e13fb026b88715e660d44 *man/figures/README-heatmaps1-2.png
a97e55d3d02f58bb65d5bc6ead09f92a *man/figures/README-kneeplot-1.png
7969dd1f4ff7383aba65fb19788f0da5 *man/figures/README-umap1-1.png
a7822cb8ac3fcd43f9fe2eef5ab0f5a5 *man/figures/README-umap2-1.png
aabf72dedf2a67d033cfd44cb580cdd1 *man/figures/logo.png
4f1b18a1800e200bed8796c7ff9c35a5 *man/getChrOrder.Rd
3543ee82cb5602341d6478b1cc2adbc6 *man/getCytobands.Rd
10a5e420513c3a77e61272dcebd39395 *man/getGMMBoundaries.Rd
275092ae3e589157aa0737d58fc106cb *man/getTidyData.Rd
2e22bf7f29a4ccc78ab6dd50a81e913a *man/karyotapR-package.Rd
5e6fd1790690acee757a8b9a2bc94ce7 *man/moveNonGenomeProbes.Rd
207bf7b8bac28389601fd1b96e690803 *man/newTapestriExperimentExample.Rd
4eebcc33a1fc056e865ee3dcc9d027e0 *man/plotCopyNumberGMM.Rd
ddff182f8465dbeaa07a709b15f6eaee *man/reducedDimPlot.Rd
5e03e2aedf129fd69304afcdd723ddf0 *man/runClustering.Rd
13b358fc0f0048445241093875dfea0f *man/runPCA.Rd
13e14e91e51b2f84d0751c69ac947f09 *man/runUMAP.Rd
3d44f8932f74b62f714161b6014c9d25 *man/slotGettersSetters.Rd
882968fe900e78d6c0fba9fbb36f4347 *tests/testthat.R
a4a61d497ef2c7ca45a0c11c991d063b *tests/testthat/test-normalization.R
