Variational Bayes for Latent Patient Phenotypes in EHR

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Documentation for package ‘VBphenoR’ version 1.0.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

logit_CAVI	Variational inference for Bayesian logistic regression using CAVI algorithm
run_Model	Run the Variational Bayes patient phenotyping model
scd_cohort	Synthetic Sickle Cell Anaemia data
vb_gmm_cavi	Main algorithm function for the VB CAVI GMM
VB_GMM_ELBO	Calculate the Evidence Lower Bound (ELBO)
VB_GMM_Expectation	Variational Bayes Expectation step
VB_GMM_Init	Initialise the variational parameters and the hyper parameters
VB_GMM_Maximisation	Variational Bayes Maximisation step