Unified Dynamic Deep 'BART' for Interval-Censored Survival


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Documentation for package ‘uddbart’ version 0.2.0

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auc_td Time-dependent (cumulative/dynamic) AUC
brier_score Inverse-probability-of-censoring-weighted Brier score
calibration_table Calibration table for a landmark prediction
cml_data CML molecular-monitoring data (real cohort) for U-DDBART-IC
cml_event CML molecular-monitoring data (real cohort) for U-DDBART-IC
cml_long CML molecular-monitoring data (real cohort) for U-DDBART-IC
compute_survival_from_hazard Discrete-time survival from interval hazards
construct_latent_state Construct the latent molecular-response state
fit_bart_hazard Fit the logit-link interval hazard
fit_uddbart_vi Fit the UDDBART-VI interval hazard
interval_survival_likelihood Interval-censored survival (log-)likelihood
make_followup_grid Construct a discrete follow-up grid
plot.uddbart Plot dynamic risk curves from a U-DDBART-IC fit
predict.uddbart Dynamic landmark risk prediction from a U-DDBART-IC fit
prepare_uddbart_data Prepare interval-censored data for U-DDBART-IC
print.summary.uddbart Summarise a U-DDBART-IC fit
print.uddbart Fit the unified U-DDBART-IC model
simulate_uddbart_data Simulate irregular longitudinal biomarkers with interval-censored events
summary.uddbart Summarise a U-DDBART-IC fit
uddbart Fit the unified U-DDBART-IC model