Time Series with Matrix Profile

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Documentation for package ‘tsmp’ version 0.5.1

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

tsmp-package	Matrix Profile for R
analyze	Runs an appropriate workflow based on the parameters passed in.
as.arccount	Convert a TSMP object into another if possible
as.chain	Convert a TSMP object into another if possible
as.discord	Convert a TSMP object into another if possible
as.fluss	Convert a TSMP object into another if possible
as.matrixprofile	Convert a TSMP object into another if possible
as.motif	Convert a TSMP object into another if possible
as.multimatrixprofile	Convert a TSMP object into another if possible
as.multimotif	Convert a TSMP object into another if possible
as.pmp	Convert a TSMP object into another if possible
as.salient	Convert a TSMP object into another if possible
as.valmod	Convert a TSMP object into another if possible
as_ts_data	Standardize Time Series Input Data
av_apply	Corrects the matrix profile using an annotation vector
av_complexity	Computes the annotation vector that favors complexity
av_hardlimit_artifact	Computes the annotation vector that suppresses hard-limited artifacts
av_motion_artifact	Computes the annotation vector that suppresses motion artifacts
av_stop_word	Computes the annotation vector that suppresses stop-word motifs
av_zerocrossing	Computes the annotation vector that favors number of zero crossing
compute	Computes the Matrix Profile or Pan-Matrix Profile
convert_data	Standardize Time Series Input Data
discords	Search for Discord
dist_profile	Calculates the distance profile using MASS algorithms
find_chains	Find Time Series Chains
find_discord	Search for Discord
find_discord.MatrixProfile	Search for Discord
find_discord.PMP	Search for Discord
find_motif	Search for Motifs
find_motif.MatrixProfile	Search for Motifs
find_motif.MultiMatrixProfile	Search for Motifs
find_motif.PMP	Search for Motifs
find_snippet	Time Series Snippets: A New Primitive for Time Series Data Mining
floss	Fast Low-cost Online Semantic Segmentation (FLOSS)
floss_cac	FLOSS - Corrected Arc Counts
floss_extract	FLOSS - Extract Segments
fluss	Fast Low-cost Unipotent Semantic Segmentation (FLUSS)
fluss_cac	FLUSS - Corrected Arc Counts
fluss_extract	FLUSS - Extract Segments
fluss_score	FLUSS - Prediction score calculation
get_data	Get the data included in a TSMP object, if any.
ipaa	Inverse Piecewise Aggregate Approximation
min_mp_idx	Get index of the minimum value from a matrix profile and its nearest neighbor
motifs	Search for Motifs
motifs_discords_small	Just a synthetic dataset for testing
mpdist	MPdist - Distance between Time Series using Matrix Profile
mp_fluss_data	Original data used in the FLUSS paper
mp_gait_data	Original data used in the Time Series Chain demo
mp_meat_data	Original data used in the Salient Subsequences demo
mp_test_data	Original data used in the STDS demo
mp_toy_data	Original data used in the mSTAMP demo
mstomp	Multivariate STOMP algorithm Parallel version
mstomp_par	Multivariate STOMP algorithm Parallel version
paa	Piecewise Aggregate Approximation
plot	Plot a TSMP object
plot.ArcCount	Plot a TSMP object
plot.Chain	Plot a TSMP object
plot.Discord	Plot a TSMP object
plot.Floss	Plot a TSMP object
plot.Fluss	Plot a TSMP object
plot.MatrixProfile	Plot a TSMP object
plot.Motif	Plot a TSMP object
plot.MultiMatrixProfile	Plot a TSMP object
plot.MultiMotif	Plot a TSMP object
plot.PMP	Plot a TSMP object
plot.Salient	Plot a TSMP object
plot.SimpleMatrixProfile	Plot a TSMP object
plot.Snippet	Plot a TSMP object
plot.Valmod	Plot a TSMP object
plot_arcs	Plot arcs between indexes of a Profile Index
pmp	Pan-Matrix Profile
pmp_upper_bound	Pan Matrix Profile upper bound
read_json	Read TSMP object from JSON file.
remove_class	Remove a 'TSMP' class from an object
salient_mds	Convert salient sequences into MDS space
salient_score	Computes the F-Score of salient algorithm.
salient_subsequences	Framework for retrieve salient subsequences from a dataset
sdts_predict	Framework for Scalable Dictionary learning for Time Series (SDTS) prediction function
sdts_score	Computes the F-Score of a SDTS prediction
sdts_train	Framework for Scalable Dictionary learning for Time Series (SDTS) training function
set_data	Set/changes the data included in TSMP object.
simple_fast	Compute the join similarity for Sound data
stompi_update	Real-time STOMP algorithm
tsmp	Computes the Matrix Profile and Profile Index
valmod	Variable Length Motif Discovery
visualize	Plots an object generated from one of the algorithms. In some cases multiple plots will be generated
write_json	Write a TSMP object to JSON file.
write_json.MatrixProfile	Write a TSMP object to JSON file.
write_json.PMP	Write a TSMP object to JSON file.