Package: downscale
Type: Package
Title: Downscaling Species Occupancy
Version: 5.1.4
Date: 2025-12-14
Authors@R: person("Charles", "Marsh", email = "charlie.marsh@mailbox.org", role = c("aut", "cre", "cph"), comment = c(ORCID="0000-0002-0281-3115"))
Maintainer: Charles Marsh <charlie.marsh@mailbox.org>
URL: https://github.com/charliem2003/downscale
Description: Uses species occupancy at coarse grain sizes to predict species occupancy at fine grain sizes. Ten models are provided to fit and extrapolate the occupancy-area relationship, as well as methods for preparing atlas data for modelling. See Marsh et. al. (2018) <doi:10.18637/jss.v086.c03>.
License: GPL-2
Depends: R (>= 3.0.0)
Imports: cubature (>= 1.1-2), graphics, grDevices, methods, minpack.lm
        (>= 1.1-9), Rmpfr, stats, sf (>= 1.0-9), terra (>= 1.7-3)
Suggests: rgbif (>= 0.9.2), knitr, rmarkdown, bookdown
Collate: 'checkInputs.R' 'DataInput.R' 'downscale.R' 'OptimisePars.R'
        'OptimiseParsGNB.R' 'OptimiseParsFNB.R' 'OptimiseParsLogis.R'
        'OptimiseParsThomas.R' 'PredictFunctions.R' 'ResidFunctions.R'
        'StartingParams.R' 'ThomasFunctions.R'
        'plot.predict.downscale.R' 'predict.downscale.R'
        'ensemble.downscale.R' 'upgrain.R' 'hui.downscale.R'
        'HuiFunctions.R' 'upgrain.threshold.R' 'zzz.R'
RoxygenNote: 7.2.3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2025-12-14 22:59:35 UTC; charlie
Author: Charles Marsh [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-0281-3115>)
Repository: CRAN
Date/Publication: 2025-12-14 23:30:02 UTC
Built: R 4.6.0; ; 2026-04-25 16:47:48 UTC; unix
