Imports: vegan, randomcoloR, ape, car, cluster

Depends: R (>= 3.5)
Imports: ggpubr, checkmate, knitr, ggplot2, colorspace, dplyr, mgcv,
scales, tidyr, stringr
Suggests: testthat (>= 3.0.0), rmarkdown, covr

Depends: R (>= 3.2.0)
Imports: nlme, lattice, graphics, methods, stats, utils, parallel, Rcpp
(>= 0.12.0), digest
LinkingTo: Rcpp
Suggests: gee, expm, igraph, phangorn, xml2

Depends: R (>= 3.1.3), methods, ape, phangorn
Imports: utils, graphics, stats, adegenet
Suggests: testthat, knitr, rmarkdown

Depends: R (>= 2.10)
Imports: htmltools, htmlwidgets (>= 1.5.3), magrittr, rlang, ggplot2,
jsonlite, shiny (>= 1.1.0)
Suggests: testthat, knitr, scales, rmarkdown, covr

Imports: stats (>= 3.5.2), graphics (>= 3.5.2)

Depends: R(>= 3.0.0)
Imports: graphics, openssl, kmer (>= 1.0.0), Rcpp (>= 0.12.5), stats
LinkingTo: Rcpp
Suggests: ape (>= 4.0), knitr, qpdf, rmarkdown, testthat

Depends: R (>= 3.5.0)
Suggests: testthat (>= 3.0.0), ggplot2, knitr, rmarkdown, vdiffr

Depends: R (>= 3.5.0), shinyBS
Imports: cowplot, data.table, doParallel, dplyr, DT, foreach, ggplot2,
gridExtra, htmltools, methods, plotly, rlang, shiny,
shinythemes

Imports: attempt, config, ggraph, glue, golem, htmltools, igraph,
rhandsontable, rmarkdown, shiny, shinyjs, shinymaterial

Depends: R (>= 3.1.1)
Suggests: knitr, MASS, vcdExtra, nnet, survival, pROC

Imports: ggfun (>= 0.1.3), ggplot2, ggplotify, patchwork, magrittr,
methods, utils, yulab.utils (>= 0.1.9), pillar

Depends: R (>= 4.1.0)
Imports: aplot (>= 0.2.3), dplyr, forcats, ggfun (>= 0.1.1), ggplot2,
grid, maftools, purrr, rlang, stats, tibble, tidyr, utils,
ggstar, yulab.utils (>= 0.0.8)
Suggests: ggtree, data.table, RColorBrewer, R.utils

Depends: R (>= 3.0.0)
Suggests: tkrplot, jpeg, png, splines, utils, tcltk

Depends: R (>= 4.00)
Imports: dplyr, tidyr, purrr, this.path, flextable, officer,
tidyselect, utils, arsenal
Suggests: rmarkdown, knitr, testthat, tibble

Imports: Rcpp (>= 1.0.0), maxLik, mnormt, mvtnorm, graphics,
randtoolbox, numDeriv, parallel, Deriv, matrixStats, RSGHB,
coda, tibble, stringr, bgw (>= 0.1.3), cli, Rsolnp, rstudioapi