Depends: R (>= 3.5.0)
Imports: batchtools (>= 0.9.11), checkmate (>= 1.8.5), colorspace (>=
1.4-1), data.table (>= 1.11.2), dendextend, fs (>= 1.2.0),
future, lda (>= 1.4.2), parallelMap, progress (>= 1.1.1),
stats, utils
Suggests: covr, RColorBrewer (>= 1.1-2), testthat, tosca

Imports: folda, ggplot2, grDevices, magrittr, stats, utils, visNetwork
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: coda, digest, extraDistr, graphics, grDevices, lubridate,
magrittr, memoise, methods, mvtnorm, nnet, progress, stats,
topicmodels, viridis
Suggests: knitr, pkgdown, rmarkdown, testthat, vdiffr

Suggests: mallet, lda, topicmodels, gistr (>= 0.0.8.99), servr, shiny,
knitr, rmarkdown, digest, htmltools

Depends: R (>= 4.1.0)
Imports: Rcpp (>= 1.0.6), gtools, LaplacesDemon, dplyr, plyr, tidyr,
ggplot2, latex2exp, reshape2, RColorBrewer
LinkingTo: Rcpp, RcppArmadillo, RcppProgress, rgen
Suggests: rmarkdown, knitr

Depends: R (>= 4.2.0)
Imports: stats, utils, gnorm, optimx, xts (>= 0.10-0), zoo, moments,
parallel, graphics, scales, ggplot2, grid, yaml, methods
Suggests: knitr, testthat, depmixS4, roxygen2, R.rsp, shape

Imports: GUniFrac, vegan, permute, parallel, BiocParallel, matrixStats,
castor, phangorn, modeest

Imports: Rcpp (>= 1.0.12), terra, doParallel, xgboost, ranger, parsnip,
dials, bundle, recipes, rsample, tune, workflows, magrittr,
hardhat, ggplot2, spatstat.geom, spatstat.explore, nloptr, GET,
progress, dplyr, future, furrr, yardstick

Depends: R (>= 2.10)
Imports: Rcpp, foreach, doParallel, ashr, corrplot, lpSolve, abind,
modeest, matrixStats
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, covr, knitr, rmarkdown, updog (>= 2.0.2),
VariantAnnotation

Depends: R (>= 3.5)
Imports: data.table, foreach, MASS, Rcpp, stats
LinkingTo: Rcpp, RcppArmadillo
Suggests: GA, knitr, rmarkdown, testthat, ggplot2, patchwork, doFuture,
future

Depends: R (>= 3.5.0)
Imports: Rcpp, tdata, Rdpack (>= 0.7), MASS
LinkingTo: BH, Rcpp
Suggests: knitr, testthat, rmarkdown, kableExtra, moments, systemfit