Imports: Formula, utils, stringmagic(>= 1.2.0)
Suggests: knitr, rmarkdown, stats, graphics

Imports: stats, fastDummies, Matrix, methods, Rcpp (>= 0.12.15),
transport

Imports: nleqslv, survival, Rcpp, data.table

Imports: graphics, grDevices, PBSmapping, raster, sp, spatstat.geom,
spatstat.linnet, spatstat (>= 2.0-0), spdep, stats, utils

Suggests: rmarkdown, scales, modelsummary, knitr, tidyverse

Imports: dplyr, ggplot2, purrr, htmltools, sf, htmlwidgets, jsonlite,
leaflet, sp, stats, methods, gganimate, magick, mapview,
webshot, animation, png, grDevices

Depends: R (>= 4.1.0)
Imports: withr, parallel, DEoptim, dfoptim, Rcpp, Rdpack, progress,
stats, lifecycle
LinkingTo: Rcpp
Suggests: testthat (>= 3.0.0), cowsay, knitr, rmarkdown, DMCfun,
truncnorm, vdiffr

Imports: DALEX, dplyr, tidyr, ingredients

Imports: seqinr, ggplot2, parallel, future, doParallel, foreach,
tidyverse, dplyr, reshape2, Rdpack

Suggests: knitr, rmarkdown, devtools, roxygen2, irlba

Depends: R (>= 4.0)
Imports: caret, randomForest, GenomicRanges, GenomeInfoDb,
GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene,
TxDb.Hsapiens.UCSC.hg38.knownGene, S4Vectors, org.Hs.eg.db,
rlang,
Suggests: testthat, covr, knitr, rmarkdown

Suggests: covr, ggplot2, mockery, testthat (>= 3.0.0), tibble, vdiffr

Depends: R (>= 3.5.0), limma, utils, grDevices, DESeq2,
SummarizedExperiment
Imports: stats, graphics, ggplot2, ggfortify, rlang
Suggests: parallel, shiny, shinyBS, shinycssloaders, shinyjs,
shinyWidgets, sortable, testthat, knitr, rmarkdown, sva,
VennDiagram, plotly, svglite

Depends: R (>= 3.5),
Suggests: knitr, rmarkdown, testthat (>= 3.0.0),

Depends: R (>= 3.0.0)
Imports: shiny, ggplot2, data.table, survival, lifecycle
Suggests: DT, shinydashboard, knitr, rmarkdown, kableExtra

Suggests: testthat, knitr, rmarkdown, ggsci

Imports: gam, janitor, reshape2, stringr, tidyr, dplyr, SuperLearner,
ggplot2, nnet, nnls, parallel, ranger

Imports: Rcpp, BiasedUrn, rootSolve, future, future.apply, Rdpack (>=
2.6)

Imports: DatabionicSwarm
Suggests: plotly, geometry, deldir, FCPS, ProjectionBasedClustering (>=
1.2.1), DataVisualizations, FastKNN, ggplot2, pcaPP,pracma,
spdep, grid, igraph, cccd, sf