Depends: R (>= 4.1.0)
Imports: base64enc, curl, digest, httr2 (>= 1.0.4), jsonlite, methods,
utils, stats, Rcpp, xml2
LinkingTo: Rcpp
Suggests: covr, crayon, mockery, withr, rstudioapi, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: MASS, Rmisc, plyr, DescTools, lmtest,dplyr

Depends: R (>= 3.10)
Imports: rgenoud, ggplot2, stats, qcc, grDevices, ggpubr, methods

Imports: deSolve, ade4, ape, DDD, phytools, graphics, stats, utils

Depends: R (>= 3.6.0), methods, pbdMPI (>= 0.3-1)

Imports: broom, dplyr, MASS, methods, numDeriv, Matrix (>= 1.2.3), doBy
(>= 4.6.22)

Depends: R (>= 4.4.0), Matrix, lattice, splines, MASS
Imports: methods

Depends: R (>= 3.4.4)
Suggests: testthat, knitr, rmarkdown, ggplot2, gridExtra

Suggests: PerformanceAnalytics, grid, testthat, doParallel, parallel,
knitr, spelling

Depends: gamlss.dist, R (>= 2.10)
Imports: copula, data.table, gamlss, methods, purrr, stats, stringr,
utils
Suggests: ggplot2, knitr, rmarkdown, spelling, testthat (>= 3.0.0)

Imports: bigutilsr (>= 0.3), data.table, ggplot2 (>= 3.4), magrittr,
mmapcharr (>= 0.3), Rcpp (>= 0.12.8), RSpectra
LinkingTo: mmapcharr, Rcpp, rmio
Suggests: plotly, shiny, spelling, testthat, vcfR

Depends: R (>= 3.2.2)
Imports: reshape2, methods, pander, ggplot2, Matrix

Depends: R (>= 3.5.0)
Imports: stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc (>=
1.0-26), fastICA, clue
LinkingTo: Rcpp (>= 0.11.0), RcppArmadillo, BH
Suggests: MASS, Matrix, Rgraphviz, mvtnorm, huge, ggplot2, dagitty

Depends: R (>= 3.5.0)
Suggests: optmatch, testthat, knitr, rmarkdown, R.rsp

LinkingTo: Rcpp, RcppEigen (>= 0.3.3.3.0)

Imports: Biobase, lattice, ComplexHeatmap, impute

Depends: R (>= 2.10)
Imports: ggplot2, tibble, ggrepel, dplyr, data.table

Imports: dplyr (>= 1.0.0), Rcpp (>= 1.0.11), tibble

Imports: methods, stats, graphics, oompaBase, kernlab, changepoint, cpm

Depends: R (>= 3.5.0)
Imports: combinat, interp, gMOIP, plot3D, plotrix, Rdpack (>= 0.7)
Suggests: knitr, scatterplot3d, spatstat.random, rmarkdown, bookdown,
spelling