Depends: R (>= 3.5), survival, igraph, methods

Imports: curl, R6, stringr, stringi, magrittr, assertthat, base64enc,
utils, rvest, xml2

Depends: R (>= 4.2)
Imports: rootSolve, stats, geepack, sandwich, mgcv, randomForest,
ranger
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), SuperLearner, earth,
dplyr

Depends: R (>= 3.0.1), methods
Imports: knitr, rmarkdown, plotly (>= 3.6.0), ggplot2 (>= 1.0.1),
robustbase (>= 0.92-6), quantreg (>= 5.01), glmnet

Imports: Matrix, foreach, glmnet, mvtnorm, ncvreg (>= 3.8-0), survival

Suggests: Biostrings, knitr, rmarkdown, testthat (>= 3.0.0)

Imports: Rcpp, fastkmedoids, RcppParallel (>= 5.1.10), data.table,
dplyr, Matrix, rlang
Suggests: knitr, rmarkdown, cluster, fastcluster

Suggests: survRM2, testthat (>= 3.0.0), TSHRC

Imports: Rcpp (>= 1.0.3), RcppParallel (>= 5.0.0)

Imports: stats, data.table, officer (>= 0.3.6), cellranger, writexl,
grDevices, xml2 (>= 1.1.0), htmltools, utils, scales

Depends: R (>= 4.0), cp4p, caret, statmod, MALDIquant, MALDIrppa,
Imports: e1071, MALDIquantForeign, mixOmics, reshape2, ggplot2, nnet,
dplyr, VSURF, metap, xgboost, glmnet, Boruta, mltools, mclust,
stats, limma, car, vita, randomForest
Suggests: knitr, rmarkdown,

Depends: R (>= 3.5)
Imports: gtools, Matrix, mclust, mnormt, mvtnorm, psych, cluster,
ggplot2, GGally

Depends: R (>= 3.2.0)
Imports: stats, utils, parallel, lpSolve, ggplot2, lpSolveAPI, Rglpk,
Rdpack
Suggests: Synth, DEoptim, rgenoud, DEoptimR, GenSA, GA, soma, cmaes,
Rmalschains, NMOF, nloptr, pso, LowRankQP, kernlab, reshape,
knitr, rmarkdown

Depends: R (>= 3.5.0), ape (>= 5.0), phangorn
Imports: zipfR, graphics, stats, Rdpack, foreach, doParallel, methods,
Rcpp (>= 1.0.10), igraph (>= 2.0.0)
LinkingTo: Rcpp, RcppProgress
Suggests: knitr, rmarkdown

Imports: Rdpack, kSamples, graphics, stats, methods

Imports: methods, httr, jsonlite, pander, stringi, dplyr, utils
Suggests: knitr, rmarkdown, testthat, mscsweblm4r

Suggests: knitr, rmarkdown, covr, testthat (>= 2.1.0), rvest, xml2, zoo

Imports: methods, httr, jsonlite, pander
Suggests: knitr, rmarkdown, testthat, mscstexta4r