Depends: R (>= 3.2.0)
Imports: methods, data.table (>= 1.12.4)
Suggests: rmarkdown, knitr, kableExtra, magrittr, testthat (>= 3.0.0)

Suggests: BiocManager, covr, devtools, ggplot2, ggraph, graphlayouts,
igraph, knitr, miniCRAN, plyr, rmarkdown, scales, shiny,
shinycssloaders, spelling, stringi, testthat (>= 2.1.0), vcr

Imports: grDevices, graphics, stats, doParallel, foreach, parallel,
GpGp, Matrix, Rcpp, mvtnorm, FNN

Imports: ROCR, caret, neuralnet, SuperLearner, class, xgboost,
randomForest, glmnet, gam, e1071, gbm, Hmisc, ggplot2, dplyr,
tidyr, magrittr, weights

Imports: utf8, httr, tibble, purrr, tokenizers, jsonlite, readr
Suggests: dplyr

Depends: R (>= 3.5.0)
Imports: skmeans, extraDistr, dplyr, Rfast, entropy, ggplot2, graphics,
MASS

Imports: stats, graphics, utils, Matrix, methods

Depends: R (>= 2.10)
Imports: Biostrings, dplyr, ggplot2, ggthemes, keras, magrittr, purrr,
reticulate, rlang, seqinr, tensorflow
Suggests: covr, kableExtra, knitr, rmarkdown, stringr, testthat

Depends: R (>= 4.0.0), tensorflow (>= 2.2.0), tfprobability, keras (>=
2.2.0)
Imports: mgcv, dplyr, R6, reticulate (>= 1.14), Matrix, magrittr,
tfruns, methods, coro (>= 1.0.3), torchvision (>= 0.5.1), luz
(>= 0.4.0), torch
Suggests: testthat, knitr, covr

Imports: httr, jsonlite, assertthat, clipr, rstudioapi, crayon

Depends: R (>= 3.5)
Imports: deeptimedata, ggplot2 (>= 3.5.0), utils, ggforce, grid,
gridExtra, gtable, methods, stats, lattice, rlang (>= 1.1.0),
scales, ggfittext, curl, cli, lifecycle, grImport2, ggh4x
Suggests: geomtextpath, phytools, dplyr, divDyn, gsloid, ape,
palaeoverse, paleotree, dispRity, ggtree (>= 3.6.1), testthat
(>= 3.0.0), vdiffr (>= 1.0.8), knitr, rmarkdown, withr,
ggpattern, ggrepel, rmacrostrat, svglite

Depends: R (>= 4.0.0), tensorflow (>= 2.2.0), keras (>= 2.2.0),
tfprobability (>= 0.15), deepregression (>= 2.2.0)
Imports: mlt, data.table, variables, stats, purrr, survival, R6,
Formula, reticulate
Suggests: testthat, knitr, ordinal, tram, cotram, covr

Imports: ActivePathways, pbapply, dplyr, ggplot2, glmnet, utils, stats,
ggrepel, downloader