Imports: lattice, stats, Rcpp, methods, markdown, pbapply, lpSolve

Imports: Rcpp (>= 0.12.17), stats, GPArotation

Depends: R (>= 3.1)
Imports: GPArotation, mirtjml, graphics, stats

Imports: mvtnorm, stats, MASS, norm, methods, abind, glmnet

Imports: grDevices, graphics, stats, tcltk

Suggests: mixAK (>= 2.6), BRugs (>= 0.8-6)

Imports: stats, Matrix, MASS, ucminf, numDeriv, foreach, mlogit

Depends: R (>= 4.1.0), phyloseq, ggplot2 (>= 3.5.0), dada2, dplyr,
purrr
Imports: ape, lifecycle, rlang, stats
Suggests: adespatial, ANCOMBC, BiocManager, Biostrings, circlize,
ComplexUpset, DECIPHER, DESeq2, devtools, DT, edgeR,
formattable, ggalluvial, ggfittext, gghalves, ggh4x, ggnetwork,
ggstatsplot, ggridges, ggVennDiagram, glmulti, gtsummary,
grDevices, grid, gridExtra, here, httr, igraph, iNEXT,
indicspecies, IRanges, jsonlite, knitr, magrittr, methods, mia,
mixtools, multcompView, networkD3, pak, patchwork, pbapply,
permute, phangorn, phyloseqGraphTest, pkgnet, plotly, plyr,
reshape2, rmarkdown, rotl, Rtsne, scales, seqinr, SRS, stringr,
SummarizedExperiment, testthat (>= 3.0.0), tibble, tidyr,
treemapify, umap, uwot, vegan, venneuler, vctrs, viridis,
withr, spelling

Suggests: mice, knitr, rmarkdown, testthat

Suggests: dplyr, glue, knitr, readr, rmarkdown, spelling, stats,
stringr, testthat (>= 3.0.0), tibble, withr

Depends: R (>= 2.10)
Imports: forrel, pedtools, dplyr, tidyr, tidyverse, DirichletReg,
stats, purrr, patchwork, reshape2, graphics, ggplot2, shiny

Depends: R (>= 3.2.3), vegan, ape, aSPU,cluster

Depends: R (>= 3.5.0), mixtools, boot, tseries

Depends: R (>= 3.5.0)
Imports: Amelia, data.table, dplyr, ggdendro, ggplot2, Hmisc, ltm,
magrittr, MASS, Matrix, mi, mice, missForest, missMDA,
pcaMethods, plyr, rlang, stats, utils, tidyr, VIM
Suggests: testthat, knitr, rmarkdown, devtools

Imports: stats, graphics, mvtnorm, factoextra, Rcpp, ggplot2, glmnet

Depends: survival, rms, relsurv, cmprsk, MASS, methods

Imports: Formula (>= 1.2-3), cobalt (>= 4.1.0)

Imports: ggpubr, ggmcmc, ggthemes, BCEA, ggplot2, grid, gridExtra,
bayesplot, methods, R2jags, loo, coda, mcmcr