da1c2e15ba3d6c813b167f87a93daa46 *DESCRIPTION
6b4a6fb39eb0e7f2575dc5fef16bb28c *NAMESPACE
9dfeea1f0e842084d516f194fd1a0bae *NEWS.md
cc92b261036211439c62de18c8b2f41b *R/cinaR.R
10eefb53c503530fdbcd7e69159c7108 *R/color_values.R
33a511f9af9da40123d7c335a5c2a62f *R/enrichment_functions.R
e18996488cb2504c726eb7896c9a58c3 *R/example-data.R
a446514c78ca20721cc338e75674033d *R/prep_scATAC.R
267aa024d75aa7754838fc81ed46a2f8 *R/prep_scATAC_seurat.R
c0f80ddf4cad49d3c2728e5a38c64077 *R/utils.R
98c6e15569e3799b67ff2ea8c9707819 *R/visualization_functions.R
1d88e48a25c2991eabccddea6cbd4954 *R/zzz.R
daacfd7fe0387d11625bf148a9d896ea *README.md
0e5ec0050db535c72a16a0ad4fb9607c *build/vignette.rds
c7602e76faef1092b633bc3dced89df2 *data/VP2008.rda
73941f9c9c0a2c03cd8ba1c6fb2cabde *data/atac_seq_consensus_bm.rda
07ab208ba738dadc37fd39fd99199b03 *data/grch37.rda
c5cf181c2b6399d47f68e26bdb079d06 *data/grch38.rda
02bf00d3ca77f9b59fd6c9ed0d52bcb5 *data/grcm38.rda
e9566949075f27721edc60d4da83fead *inst/CITATION
afd36ab46d2ad4160dd14a7c66934c8c *inst/doc/cinaR.R
47875b0373f2fc8e788f282c96cd312c *inst/doc/cinaR.Rmd
f3515b3b71a177c5218a6f233f10d499 *inst/doc/cinaR.html
e505c583a4730dff2227ed74c116efdc *man/GSEA.Rd
fdea5e9f1631f984c8848b1f03845ae6 *man/HPEA.Rd
805c7f7463aa78540c8f7afe94125b20 *man/annotatePeaks.Rd
f2a17b33df8a6f0d48679b29f79b7157 *man/bed.Rd
54b73ad204fe15e3c9f75b02dbeb6121 *man/cinaR.Rd
e05842728b6c94a29be75544ad588725 *man/color_values.Rd
adbadbed26c2824c1679860243bbe470 *man/differentialAnalyses.Rd
bd3884471cc711bf734f0f59c09d94d1 *man/dot_plot.Rd
8d00d210c276467cd2936dc555fd161b *man/figures/cinaR.png
54508e74f1fa995e3ff334f9ecfaca7e *man/figures/overview@5x.png
48463dbdcfddf414fdfa316c452c725f *man/figures/unnamed-chunk-3-1.png
70bf7441d125b93a00f939097af49797 *man/figures/unnamed-chunk-4-1.png
01781a157013eac39624717ee4b9a121 *man/figures/unnamed-chunk-5-1.png
bb62381b30f24dc1e021357d7dbd2d7d *man/figures/unnamed-chunk-6-1.png
c4c85d14a25f29dfd43b4597714735a6 *man/filterConsensus.Rd
72a8f31d1aed2c9535fdb15634b3c412 *man/grch37.Rd
2628097c6cf5992f44e6803dbb7162f5 *man/grch38.Rd
a2ae792d137a58570e67f3f11de2d507 *man/grcm38.Rd
e80be7eb61e53017ced74ee37fd6477c *man/heatmap_differential.Rd
1fd658b790b63dd8c7221aed06c44a40 *man/heatmap_var_peaks.Rd
bee5ae3187e30ab32f086aa44f0dd577 *man/normalizeConsensus.Rd
1d16ba4be1b56b021c162e82aece0791 *man/pca_plot.Rd
a3bb26f8ebfde935fd74e5a2f28ae123 *man/prep_scATAC_cinaR.Rd
5b428c27d061e3250d3c80d1162e0cc4 *man/prep_scATAC_seurat.Rd
6264a46c2a9516eb19ad90b55c31c1f6 *man/run_enrichment.Rd
ce4929f25bdea4b03e6b4112f7664cf3 *man/scale_rows.Rd
14acc2374502b2630168359a92a01ba1 *man/show_comparisons.Rd
da1f50f08979cd63947c5fa465717e7f *man/verboseFn.Rd
870ea1c76ab0413abba8c19e87c46771 *man/vp2008.Rd
47875b0373f2fc8e788f282c96cd312c *vignettes/cinaR.Rmd
