# Generated by roxygen2: do not edit by hand

export(cleanSeqs)
export(findNovelAlleles)
export(findUnmutatedCalls)
export(genotypeFasta)
export(getMutCount)
export(getMutatedPositions)
export(getPopularMutationCount)
export(inferGenotype)
export(insertPolymorphisms)
export(plotGenotype)
export(plotNovel)
export(readIgFasta)
export(reassignAlleles)
export(selectNovel)
export(sortAlleles)
export(updateAlleleNames)
export(writeFasta)
import(doParallel)
import(foreach)
import(ggplot2)
import(iterators)
import(parallel)
importFrom(alakazam,DNA_COLORS)
importFrom(alakazam,getAllele)
importFrom(alakazam,getFamily)
importFrom(alakazam,getGene)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,arrange_)
importFrom(dplyr,as_data_frame)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,combine)
importFrom(dplyr,data_frame)
importFrom(dplyr,data_frame_)
importFrom(dplyr,desc)
importFrom(dplyr,distinct)
importFrom(dplyr,distinct_)
importFrom(dplyr,do)
importFrom(dplyr,filter)
importFrom(dplyr,filter_)
importFrom(dplyr,glimpse)
importFrom(dplyr,group_by)
importFrom(dplyr,group_by_)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_)
importFrom(dplyr,n)
importFrom(dplyr,rename)
importFrom(dplyr,rename_)
importFrom(dplyr,select)
importFrom(dplyr,select_)
importFrom(dplyr,slice)
importFrom(dplyr,slice_)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_)
importFrom(dplyr,transmute)
importFrom(dplyr,transmute_)
importFrom(dplyr,ungroup)
importFrom(graphics,plot)
importFrom(grid,grid.layout)
importFrom(grid,grid.newpage)
importFrom(grid,pushViewport)
importFrom(grid,viewport)
importFrom(lazyeval,interp)
importFrom(stats,confint)
importFrom(stats,cor)
importFrom(stats,cov)
importFrom(stats,ecdf)
importFrom(stats,lm)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(tidyr,gather)
importFrom(tidyr,gather_)
importFrom(tidyr,spread)
importFrom(tidyr,spread_)
