08b5b3f73f364edbdcca73746f3d169f *DESCRIPTION
d0631b443d141bea20be6440341cdae6 *NAMESPACE
0f5231319252d24c6da5dd1b7e4e88f9 *NEWS
d309c497f282aeb512a6c7d31ee518b0 *R/AllClasses.R
aa638a75aaa1c58c6bd121551858a36f *R/GitFunctions.R
3ec82b246f9134884805b1582a2e8e81 *R/Install.R
291d4f79b1fec8e626ca6c6a18fc8880 *R/SVNFunctions.R
e5c8fbbe5638275166986b7baa4b3cb9 *R/SwitchrParam.R
d0b256e018915ffd85a045e12057ff8e *R/Utilities.R
be621427f758075a56392948c7d1bad0 *R/accessors.R
f8f185bc141e5a54d562a310ac8f6a38 *R/allGenerics.R
7b469b3da038028552d427a6259cb8c8 *R/annotateDESCs.R
b1da0134adb4d3944a674f9c20402f26 *R/biocManifest.R
f92b95c56536a2e6dc2c3be625a5f5f4 *R/biocversion.R
62eeda861ddadf09a72f478375578b99 *R/cmethods.R
a1e063bf791e06e7ac13708821ad826f *R/conditionalCode.R
5cd58d0a43760ac960a375fa25e96ebf *R/crandbtmp.R
f1a94dfb1ca8e770678d37511cd6da0f *R/dodeps.R
57c44742e56c0d745392bd9cf8cce949 *R/findCtx.R
1024f8a480763550e860eca175c466e4 *R/flushSession.R
953a7fba4faf05b6157ab350aebd3a5e *R/head-methods.R
924ce85718e79ecb9b777a1457be6afc *R/lazyRepo.R
e266e1c0066cff0388f53a43760d5688 *R/loadGRAN.R
5c811c32f89ce32b7adec064d99a2b06 *R/loadManifest.R
c41f67ffeeef3090aecd09fa121bf2b4 *R/makeBiocVersions.R
f41a10677388af728ca5d742293e1d3b *R/makeCheckout.R
9e5afc487cc5f494d083c9f1b0fc631a *R/makeLibraryCtx.R
8678ddfecac09c8d3707e18aceb6d691 *R/makePkgSourceDir-methods.R
809635964aedcfced1e0cf18818944a2 *R/manifest.R
3aaa2cc226f2130982312eea912b42cb *R/manifestFromLib.R
8f2352cb280c179391bb191c1bf2fff8 *R/methods.R
b42b2ee084d47786c073d536843c0f6f *R/profile.R
40171d7e3146f623ce2786dddb96627e *R/removeLibrary.R
c5a6ddfe5f1f3096e7cff9e2ca569f2c *R/retrievePkgVersion.R
b2e265eee91b0e1e66a7cc9afb8bdfd6 *R/saveManifest.R
c5cdadfdaacbc91e72e34d134fe78a3d *R/sessionInfo.R
fdb15b727481e5b5ca0f2ddda83dc083 *R/show-methods.R
9a0176445fdff043d04135d4685b8012 *R/zzz.R
afceb6bf2134b019eb74bbffb26d40ee *README.md
d8c47bb611a9916a5345eff557adc19b *build/vignette.rds
958d42d5e50127a17e206769cd6eefd0 *inst/doc/switchrvign.R
923adf1950d6ec94bcd2003cff763de3 *inst/doc/switchrvign.Rnw
713e1c6e4ef75c68c70b8817fb338b21 *inst/doc/switchrvign.pdf
04a841f23adfeec02a2613b2211b5f0d *inst/examples/crandb.R
3eba8544a5c88ffbd0a2e76000fdf831 *inst/examples/lazyRepo.R
d51ac21df6b21219514f9411928b0afc *inst/examples/sessionInfo.R
c49c29960fa9b4fe5a5ec4d3aca5a2df *inst/localcheckoutest.R
6c081ce28ce9bcecf360eb409d3b2134 *inst/ropensciman.R
60e8e03162d886ea73b10cda90322655 *inst/talks/BarugLightning.org
f50e386731b0044713a15ce2143ec094 *inst/talks/JSM2015.org
0ecd3c3cf487e870314f382ba011c63d *inst/talks/JSM2015.pdf
1d043586b759a5e0b8863226b7c1df11 *inst/testlimma.R
21f61e2b04d849a72b2629420c8cb057 *inst/xtable.R
3f2e5a608b6a28bbe879b448dc0e27de *man/BiocDevel.Rd
e77dad41c831761decb168f90ead8de1 *man/BiocRelease.Rd
a4f16c89eeb283055918b9ee2bee2d00 *man/BiocSVNManifest.Rd
3f0a0b16d7df0780cbab65c522c59414 *man/BiocVers.Rd
1bd0fef1754a3c94c09a5e78f1b5fa62 *man/GithubManifest.Rd
2622e9939b425af8329a7df3c80ac1b1 *man/LibraryProfile-class.Rd
fa90fc303c5009e72ae0b5df2e0e6b64 *man/ManifestRow.Rd
0af8cc8deb1d7f242b6e234b77b12a12 *man/PkgManifest.Rd
c9898cd161eb493de416138286c3bc91 *man/PkgSource-class.Rd
017ed6c98edfde7cc379fe985aa23a67 *man/RepoSubset.Rd
4b277bf7de0d162f72521633a666d837 *man/SessionManifest.Rd
6c986ad5a1b702a9a56f827c62a2e5e4 *man/SwitchrCtx.Rd
2bd7ba52a77ab3fd060d70c8d6c114a4 *man/SwitchrParam.Rd
fdd0f36d789e4a2e1845e47b3230eec9 *man/addPkg.Rd
f16a6ed5d2928ff8e8be5fa95a21a891 *man/archive_retries.Rd
de77642537f03fdfd2403c82906bbac5 *man/archive_timing.Rd
718e7f0fe229a63e5ec27b7071d76e87 *man/biocReposForVers.Rd
590ce5e43d857369054de039ff9462b7 *man/branch.Rd
e722fa6f10bf84e127d2396dc8b9feee *man/checkIsPkgDir.Rd
ee157ba6c995e9c220aff0c2f644e561 *man/cmethods.Rd
787a57815b0128d7df04f2f8046ee884 *man/cranPkgVersManifest.Rd
bb1f756351a2747646fa955778661781 *man/currentCompEnv.Rd
8f8accd70519392a263860da7e8da354 *man/defaultRepos.Rd
87214c096171396f961457ae9bbe3a12 *man/dep_repos.Rd
a31aeeb9b82a3b1d4fec96e785577a66 *man/dl_method.Rd
602d97c465e03d12eaf71154796d3e6f *man/errorOrNonZero.Rd
de18949e2d64c680d3fae24ba606c413 *man/fileFromFileURL.Rd
ab31c78d824331ab63354b5af2f461ee *man/findPkgDir.Rd
cde3e149f3e6fa34260c5fbda26d3e5d *man/findPkgVersionInRepo.Rd
92d8d615487a2d2e311eaa4a63791caa *man/flushSession.Rd
8647660d89dc4a8ae6538ddf7b487d56 *man/full_libpaths.Rd
2483a04a69db9b3f61fc1b42aa3b7c55 *man/getPkgDir.Rd
8b258741fac19aee72674f77adaf1c3d *man/gotoVersCommit.Rd
414cb7c99dcceb36bfe2c0a2f53ef07b *man/headtail.Rd
4968305d54d9516ad90c4cb0e1d67838 *man/install.Rd
6b640615b0ce6c26c7fc1bf4a747810e *man/lazyRepo.Rd
3748ec20d43df49a9703c491c8cebe06 *man/libManifest.Rd
77f45776ad43d9e91c27e2a4c8976e64 *man/library_paths.Rd
9ab7f963130f7345e177805d8cf1d0f6 *man/librarypath.Rd
ad0799939c5d67015709ca0e7a94e97a *man/loadGRAN.Rd
85ddb04baa9223a74c56b2cfa5d1e5b4 *man/loadManifest.Rd
cd468ef108f31c2d3afff6d77114baaa *man/locatePkgVersion.Rd
3ad1e8314f4e8a699dc2571e7c88ca1f *man/location-methods.Rd
65a24e7a770c3851126737c9410c1da4 *man/logfun.Rd
6376305c3e3da4016b1ffc2f4032d906 *man/makeBiocSVNURL.Rd
c5610f1585295b7155881f8afda88954 *man/makeFileURL.Rd
eba3e601bc1898056098e7a3b94fe151 *man/makeLibraryCtx.Rd
065d66c76acd7c41c577370838760514 *man/makeManifest.Rd
f51e3c2f2bc52797ae1f074119e6822b *man/makePkgCheckout.Rd
b01e6d4baa356a02f3ae78cb84e89f91 *man/makePkgDir.Rd
aff3429876357c0b315ef63838f26085 *man/makeSeedMan.Rd
0c804f4f97585816d9d207834694f520 *man/makeSource.Rd
5049bbd63faede9719007fab1a35a7ea *man/manifest_df.Rd
0169b3e0891a81a216f77da42646a4c3 *man/manifest_methods.Rd
a93da80f9503ef49f708f63df7aa2c8f *man/normalizePath2.Rd
0e1bb00ca22185b635390cc0ada1f60e *man/notrack.Rd
2f827cba71502d287724b499dd58de3d *man/nrow.Rd
f9a9b1a1d4aaaa93bad6d1178ba87726 *man/packages.Rd
2e30d66b93c455c0ca731e952982a297 *man/parseSessionInfoString.Rd
ad3e89571ec824a09cefae0cf5c7b596 *man/parsedSessionInfo-class.Rd
5d5a7085939d420924fbea7cb975ec73 *man/pkgname.Rd
09e3e346383a53997951ddb1e03e9328 *man/publishManifest.Rd
54e5e9e476ce963af16e48955cf94a7f *man/rVersionManifest.Rd
b666ea323209b094c9f3220570f07fff *man/removeLib.Rd
cb02fe2452cabe4b8ebb3e241259ad4e *man/sh_init.Rd
2114939245c07da9bd8a6d76e8d26d5e *man/shell_timing.Rd
6e1b830f599ddd682cb8748e03ed3b37 *man/subdir.Rd
8d0b01e16f3a04f36c82544c7c47e415 *man/switchBack.Rd
7e0a598e06936114a8ed7c475018b449 *man/switchDeps.Rd
b28428090029036b28708464e8951594 *man/switchTo.Rd
34556bf7b6c0872439b32880c4c68e72 *man/switchrBaseDir.Rd
586732ac8c4ddcc0b1829eccaabf4f2d *man/switchrDontUnload.Rd
b431536d7007a26b1b828bd486cc7aae *man/switchrManifest.Rd
e2c8aeb6c38ba718c79e3553fed753b0 *man/switchrNoUnload.Rd
7e67822fd3d90f7e1a0d8f8c81cf9340 *man/system_w_init.Rd
5b247d78d3c25c2b01c1edd3b3a80a7c *man/updateManifest.Rd
c800c81c4676278beaa575ef2e8478a1 *man/versions.Rd
1d494ffd35a9fa91f03e5124e4c8c171 *tests/winpath.R
923adf1950d6ec94bcd2003cff763de3 *vignettes/switchrvign.Rnw
