37e882d353664481c37b42388630e79c *DESCRIPTION
b8dbc2a60af8b7047fa7884da50e2521 *NAMESPACE
3d20735d4d4fb223bdf2a342349944e5 *R/add-to-simulation.R
60aa891795ba3b4c8c19e185fe05cdc0 *R/aggregator-class.R
f6cd48944d06a170faebb673291d5587 *R/component-class.R
2998cbae708cee95021f788651079fd6 *R/create.R
f3ed511e43dd744b9861d172faccaa8e *R/draws-class.R
7bbcf0e7e0efb12b30a0e038fd7a50f1 *R/draws.R
31c15177c5676972977ebd6dec579189 *R/evals-class.R
12dffccdf75d5b6ff2f4052b9cbe5e5d *R/evaluate.R
072db385370e45561d083cc291af0388 *R/examples.R
05af6d2f39a7d9994d88fddfb08458f0 *R/extended-method-class.R
acf567192d4cf34152f1648d5fe2a8cd *R/get-from-simulation.R
b2c342e18f120f673e9cc9f8b84b2936 *R/import_from.R
bbe934967bcc13741a7de113c0c1761a *R/load.R
33606fd7cfa99b5b68745bd785965927 *R/manage.R
42766fc7bd527f469239668be89f9d4f *R/method-class.R
414f71284b088817fef94075fbb9ae17 *R/method-extension-class.R
f2591d65a77772ffff1a8b612508b7e9 *R/methods.R
ac6a4abaf58588955973bc90db6fb0c9 *R/metric-class.R
7ff018fe549f6c0e7ccdf8a1be8958d0 *R/model-class.R
4ec2ce73ebe54fd07618b5a6d964f865 *R/models.R
a6e41f143c4c6cd44238c139900543c7 *R/output-class.R
7a90d72928fd55ed22489770b72296c0 *R/parallel-draws.R
b982f7bd1dd79330c5821ba60c440075 *R/parallel-methods.R
cbebaf450ff0e262df6d5c248f60a28a *R/parallel.R
b63579d38031242d965e2aec71a314b9 *R/plot_eval.R
20828b5fdf6e327ce64c9fbc2e9caa02 *R/plot_eval_by.R
01929d5ff7caf049a723159a4b7e890d *R/plot_evals.R
6e563799c3ecf02e0ac2a751eed8d804 *R/reference-classes.R
e70ba1c49e8f9da73bc52c27a58b4234 *R/simulation-class.R
24616845315038697f050d1e4d8b46e4 *R/tables.R
06b25ee10debbd110196430080e7cd69 *R/utils.R
2dd7cc4c70e06e69194ab0e04d1d1269 *R/zzz.R
fa1cba06bae541576b0d43d9e5f1be6b *README.md
7b9bc9b5aa3bd915f531791422736f04 *build/vignette.rds
637ee86f5562e5ec036148bc358ad786 *inst/CITATION
b1f15b0a49949add6d7e80096a65e30c *inst/doc/elastic-net.R
9cea9b2a25648b6543921b19f1963f92 *inst/doc/elastic-net.Rmd
e43c00ce8533c4542ca58b6767c0f833 *inst/doc/elastic-net.html
09bea69ed6e949001eb21cc2adfede3a *inst/doc/fdr.R
d94ac45b592928925f8c9070298b6b6b *inst/doc/fdr.Rmd
35fcbeb1cf27249f2c3ba9da22212375 *inst/doc/fdr.html
d2bf2d01b6f152f0aae624a25c03eae0 *inst/doc/getting-started.R
d5721811df4f27608aca486472b6eedf *inst/doc/getting-started.Rmd
6e3cbfa3d56dadcef2273475cc1ba313 *inst/doc/getting-started.html
b3f802da429572bc6f014963e709e830 *inst/doc/james-stein.R
9f96016d9b6f9370dd5a6b053eb0f427 *inst/doc/james-stein.Rmd
c9040011259f17b6a0f8e8096b28c302 *inst/doc/james-stein.html
d4132b656843dd0a0a2bc980012fff65 *inst/doc/lasso.R
57a3219c71c57e30d2841b59a3f6cfde *inst/doc/lasso.Rmd
fdbdef446847d82af2c8c7ab86fc621e *inst/doc/lasso.html
aaa4fbe101ae27c7391898c648a425c5 *man/Aggregator-class.Rd
4fa7e8e6d97fa1ee2d87a39fd755e4aa *man/Component.Rd
ed342e737215885a2d6eee59487c6493 *man/Draws-class.Rd
83c62447377f8a36e1145d47c5167160 *man/DrawsRef-class.Rd
91d8255efae11254a926420370fdf19d *man/Evals-class.Rd
aba2b7eeddd9f72d02067ab46549e19e *man/EvalsRef-class.Rd
6a885c24adc14fb3ecdfaeed796ed402 *man/ExtendedMethod-class.Rd
f9591c7941348cae11a9036d9614905d *man/Method-class.Rd
5a9732dd2324155d3a3f29339345949e *man/MethodExtension-class.Rd
baabcef1b7b1dc32d1f074fe1ac62d57 *man/Metric-class.Rd
eb27f4204ca3c1f6720316069bab7af7 *man/Model-class.Rd
1d4746f12e08b727378aad1fbdb5ce84 *man/ModelRef-class.Rd
c028dd8006a9046ea54d617802eec216 *man/Output-class.Rd
f2186da32f675d926376ddd9b355f210 *man/OutputRef-class.Rd
2ccfe04a2cc624168751519b72a8b9be *man/Simulation.Rd
3d722d477163037dc7b5e48fca75affc *man/add.Rd
715efc851aa45188fbdc7c47322854a4 *man/add_dref_to_list.Rd
a6193d8f74fba0d91296c4e3ce64df32 *man/add_eref_to_list.Rd
4b562ce82bf6d1b4fae1e0aa1d177f43 *man/add_oref_to_list.Rd
e75c93e723497f53b9958e1c9a1bbed8 *man/aggregate_evals.Rd
d231a9f1aa0a482ddfbb0e83f7b29d63 *man/as.data.frame.Evals.Rd
f5a26f7f15e467e1c2d033b8e1ba778f *man/as.data.frame.Model.Rd
f2c49bd69a1219f1e8056ecab275fb20 *man/as.data.frame.listofEvals.Rd
19a8bda654d0d415d234f635aade9e3a *man/as.data.frame.listofModels.Rd
7f5114bef439e905cc4b0b61ff5d26fd *man/cash-Model-method.Rd
0df431a3ac5e49946735149a8aa18735 *man/catsim.Rd
28452250eab9c96d1cbe1251a3c9ff6b *man/create.Rd
5e18fae2d16566bbdf2020a443ff5b17 *man/describe.Rd
2a7ce69afbd39305173f15b0651b9db9 *man/do_in_parallel.Rd
e1e189693784bc016ae7db68219d248f *man/draws.Rd
a9f44cefc7e9ba00bc91081c312566c8 *man/evals.Rd
112cdf55cbe1836344354547add81156 *man/evaluate.Rd
934f532579c9bc796ca8279fcb665821 *man/evaluate_internal.Rd
580dc30cee481f952a5b4625d9ba1976 *man/evaluate_single.Rd
9c2ae80fb20e42a45465079016661992 *man/generate_model.Rd
99024de213decfdad337912a59fff26a *man/get_contents.Rd
ca2f0bc4018e0ec1d8d74f75315996d4 *man/get_files_not_in_simulations.Rd
e632250694cad431d0aeedddc6997682 *man/get_model_indices.Rd
d37cbf0966f33a486dbb4ae4bdccc309 *man/get_relative_path.Rd
68588182280949b446403cbaca3f61a0 *man/get_simulation_with_all_files.Rd
3e9cadbcb9ba47b8c00424be5478708f *man/ggplot_eval.Rd
07860aae1113f21150dcceceb74b0a66 *man/grapes-greater-than-grapes.Rd
1c450cb0f0af11089b3b9804a46f7e11 *man/load-DrawsRef-method.Rd
61d9a84215956645a80066364f5426da *man/load-EvalsRef-method.Rd
7fbd815b5469617ca8387224744466fb *man/load-ModelRef-method.Rd
7944f92ab0ecf8d2247a83e5552a81ec *man/load-OutputRef-method.Rd
03f917c90004f966d36e02f2aaceab71 *man/load-list-method.Rd
7d7e01e5afd4ba856792271327f8838d *man/load_draws.Rd
022c50941ff41dddf685f2a2b8e671c4 *man/load_evals.Rd
660717c8b03dfc52706b06b814c4b805 *man/load_libraries_on_cluster.Rd
d930d3f88d9c2daf946694d6b8791146 *man/load_model.Rd
173ed5a59a08324b4648959eb9008b3e *man/load_outputs.Rd
d9985def75185aefdd914dd093d16e05 *man/load_simulation.Rd
ea1542fe94b97c12199b8c57e1e9fca4 *man/make_my_example_model.Rd
c011f2474207e046acd02f33245f21db *man/memory_as_string.Rd
5c0f3ee2dde430a3e40a5d9c833b52cb *man/model.Rd
9dfb71aab06fa1f5c134592efa120ed0 *man/model_names.Rd
b43ebc10d9569fb52f2f2c68cbeef06c *man/models_as_data.frame.Rd
cb0418619f73c4d98f916e8cb881e8ff *man/my_example_loss.Rd
d3c0e9ce7dc787cd7a5066778a882f58 *man/my_example_method.Rd
a3bfab8d703c0dff077219971fdade8b *man/new_aggregator.Rd
d0f400f8c230115ad46ecdafab358932 *man/new_extended_method.Rd
2eb1b2934c06fe1d3081558b57111260 *man/new_method.Rd
af26c070bb12f3bd267f895d1e88c842 *man/new_method_extension.Rd
e7ad6d42fdcfc81364281dfe8acd3745 *man/new_metric.Rd
81f36b51e1ca14423e74b3819c2505aa *man/new_model.Rd
6b3a532ed1fd2c78a180f29478315cbf *man/new_simulation.Rd
5d2cf7b152aafd7a0e4662039bbc34b3 *man/output.Rd
37565f6eff7116e76ad02d1b7e641d7e *man/outputs_or_evals.Rd
96519dde390f73da6179b2165d64eb2c *man/plot_eval.Rd
1af7b79937d7c227efa7edc9a84ff8c3 *man/plot_eval_by.Rd
87ee093996f4a2cdc3422b3fdba2050c *man/plot_evals.Rd
d31d3d5b3b07ebfcc8cd5ae91707707e *man/plus-Method-MethodExtension-method.Rd
269859842c8e2440135073ad8c44dcb7 *man/plus-list-MethodExtension-method.Rd
14cc0ad07c3b4de3105362702e2e1fa8 *man/recycle.Rd
ed5306e8592b53c62bedb64387ff255c *man/relabel.Rd
59d08a148f9b1194436fd539aba79805 *man/rename.Rd
a881fe8d672ceffb39f48b3c203d3b35 *man/run_extendedmethod_single.Rd
50e88fbd6bfaaad85bccfc246b4d1342 *man/run_extmethod_parallel.Rd
659e4db89193c337850b5d87c8a166ad *man/run_method.Rd
8399b5a220f460063bf45b151301fafe *man/run_method_parallel.Rd
f87369ce9e6b4d755c4e062ec2d611a0 *man/run_method_single.Rd
677b085273c327a91c33a43c9245c4e6 *man/save_simulation.Rd
70e0b45873f69d892ec115e1e0c78151 *man/simulate_from_model.Rd
3c90378cc751c53f916da52c1710e012 *man/simulate_from_model_single.Rd
bf75654abf916b5433a284d6b1d4594d *man/simulate_parallel.Rd
7b8251d18c31420cd572039c23001fec *man/subset_evals.Rd
7bb841f057ebd8c6b9ed536f21475d3f *man/subset_models.Rd
03f43aa6fcf6645492b115e03268faea *man/subset_simulation.Rd
fca945c197d5eab1806b63623721f6c4 *man/tabulate_eval.Rd
b5b2ec386be889119ed54ea8b15e2018 *tests/testthat.R
6d8c761ed882f67b9790e1fc4f0ab830 *tests/testthat/test-create.R
0e2bef2d063057cf383a233014d02863 *tests/testthat/test-draws.R
5bc571dfcafdf55204eb7ecbe7919e5b *tests/testthat/test-evaluate.R
e1bcbe7a27eedca7ede45bbd4b8b91d0 *tests/testthat/test-method-extension.R
70447786fcf0d35576ec3ea5679b659c *tests/testthat/test-method.R
14f9e41f99e7123c128dc56046b499cd *tests/testthat/test-models.R
cff7745c123b93010d98b4fab234b6a8 *tests/testthat/test-parallel.R
58fd28a5c50e2a2cfd5e01ae460b7246 *tests/testthat/test-regex.R
f1252b4e2f4eecb082374675e3afda79 *tests/testthat/test-simulation.R
7b3bcd54a2ae6b5d8c2f3f9bed2c9283 *tests/testthat/test-simulator.files.R
9a8955b03e1f0536e836de3baba89a61 *tests/testthat/test-table.R
47cc86bc76dae5b03a44bcc2c88559a6 *tests/testthat/test-utils.R
9cea9b2a25648b6543921b19f1963f92 *vignettes/elastic-net.Rmd
ddd0b7e109d10827f6af16e759655a1b *vignettes/elastic-net/eval_functions.R
3fc8b9ca451141a9b2b03ae58075d26d *vignettes/elastic-net/main.R
1cae1c60de8a95a5642111b133d9e3a5 *vignettes/elastic-net/method_functions.R
7c0dbf5e799b2c0751bcf5b1fcc384d3 *vignettes/elastic-net/model_functions.R
d16e0049f2fdc98bd73020283ac00a32 *vignettes/false-discovery-rate/eval_functions.R
48e4fd0c19afba713465a0e7edd9955d *vignettes/false-discovery-rate/main.R
01c6d79c3751e4ff4cbaecd35c75f324 *vignettes/false-discovery-rate/method_functions.R
00b023c868141faf7cb08b5f656d5844 *vignettes/false-discovery-rate/model_functions.R
d94ac45b592928925f8c9070298b6b6b *vignettes/fdr.Rmd
d5721811df4f27608aca486472b6eedf *vignettes/getting-started.Rmd
9f96016d9b6f9370dd5a6b053eb0f427 *vignettes/james-stein.Rmd
910ec6dbd6d8311190ed7926aaf6aa41 *vignettes/james-stein/eval_functions.R
f50125a4532520d3dde8c350d27ebf3d *vignettes/james-stein/main.R
60b40122ac8c98c68faee7b5814f672b *vignettes/james-stein/method_functions.R
a3cdc63362ac2c2d5b65f5d6bdd45498 *vignettes/james-stein/model_functions.R
57a3219c71c57e30d2841b59a3f6cfde *vignettes/lasso.Rmd
3f7399009beee51fafc55743bb10265a *vignettes/lasso/eval_functions.R
2a2c2c01434c2f6dc6791c3b3cfcc5d1 *vignettes/lasso/main.R
16c8ecf7c1fdd5e79b8b04296e832f5b *vignettes/lasso/method_functions.R
81120fc6615bfd8ddf2e2089c9dcf625 *vignettes/lasso/model_functions.R
