97a48a343e282f8aa1a41f518e0924bd *DESCRIPTION
b6bb4510f3c0d4891f1c92f22743da39 *NAMESPACE
0459152ff19f39aa315af7863eb72192 *NEWS.md
14daa3308b6c08490b94c067e8c57e4e *R/Gplot-internals.R
a269a6dcba3a6253c2c01705ec2c23e5 *R/Gplot.R
2a4de92c1d76bf41f87d525a97f3e49a *R/InferClasses.R
25f882c23c5fae72e03bb47953f53575 *R/InferEdges-internals.R
2ac5b555a851a145ce023d01ab1ba344 *R/InferEdges.R
059f72826f692b36ebbe612d48b12cc1 *R/SimData.R
637ac651010776358ef13f33beb49ed0 *R/init.R
56aa20db1f9ae6ecf5abb82cfbafe070 *R/plot.simone.R
ebd642d88aa06d0f97e9f043244091b9 *R/plot.simone.network.R
35c06b5ed7efbc25482dfa7fb6b2d541 *R/simone.R
7500d651321e30fa4c359078155c6ec2 *README.md
73745ac141cc5b0f41916531e219e08e *data/cancer.rdata
b2dccf5767f888e5e8268ca1fc04e8bc *demo/00Index
5274d976c9037b192df50719f9dd25d1 *demo/cancer_multitask.R
df4de51bc00a76f23d2162cb1fe143ca *demo/cancer_pooled.R
338ae30d1dcbed6d2d5251743920544f *demo/check_glasso.R
1da4b28738229b95a843eac8e3ad8155 *demo/simone_multitask.R
c75e8b4ab6cf1025f39fa95e27501c37 *demo/simone_steadyState.R
f36db8f822c13ffa111eaad26c8f899d *demo/simone_timeCourse.R
2ca0c367a7c2dbae9ee6e5ea22fc22e5 *inst/CITATION
cecf2a1fc5e3de01ffe321bbdb3bb6f5 *man/coNetwork.Rd
87a889ca7359550ff139417172f0cdb0 *man/data-cancer.Rd
6aa46713e5f98f16931ad22dde6536ae *man/getNetwork.Rd
fcbf650b58b9b4808b3514fb77f41444 *man/plot.simone.Rd
6a7746a444e1b6a2a7b99b1c61d8a57e *man/plot.simone.network.Rd
0d669c81f3c5f165b15e6ca47fa4db9a *man/rNetwork.Rd
516708e09c9fb00d91f398507e5a1715 *man/rTranscriptData.Rd
02c89237f866619c54915b14fc7dca03 *man/setOptions.Rd
e81025e4f882d9959d67d516622ef635 *man/simone-internal.Rd
882894f2f0d8bff62d2aace8fa1efc15 *man/simone-package.Rd
4be7560951ab128e5abb8c69aa1f7dce *man/simone.Rd
b54d6121bfe783907c05d9c471457980 *src/inference_algos.c
3109568b6e030da5e67e333d18d1e07e *src/inference_utils.h
b4a8752d5151636165caf4764f587bfd *src/matrix.h
5303ba2f986ac78ebbbe61acbf41d2e7 *src/simone_init.c
fa727cb212625d5e24223c1f16607c28 *src/vertex_layout.c
