df32ad90ef387bf304beedcdb988377d *DESCRIPTION
4acf9ed4b7a30add793cb0e6a7371b64 *NAMESPACE
84632df3a6204027a1a8d47a92456edc *R/RcppExports.R
bbe8bdddb374fff79e250a75fd2b5709 *R/exports.R
54467694738c51b0a5f89b1109efc8a5 *R/simdata.R
ebe0d51d9f287cd13d28c583c300de2c *R/simer.Data.R
d13748f53ba653e036fb9e2232fde76d *R/simer.Genotype.r
06656d0070b309ab2cb2c0085b1b5b52 *R/simer.Logging.R
9b704ba413e4183b5e32c1003bf5fbfc *R/simer.Parameter.r
ee70c3f1fb5f976708a35b1468ff4948 *R/simer.Phenotype.r
a5da463e0ac403251a1e0ffa05b4606d *R/simer.Reproduces.r
b2a75bdabae4d9dbad78a1e64fdda99d *R/simer.Selects.r
b34a2bbd59f908a9ce3960f067908ce7 *R/simer.Utility.R
0188f85086d0a5241db5882b83d326ba *R/simer.r
18dc763d4f693bdd4a1461510829c2e7 *R/zzz.R
6c67e95cd91fd213c3606b645737e737 *README.md
b16fe85e90eaea037664a41b3a8b298d *data/datalist
a3eca55b0191e2bbf62389e427b20ddb *data/simdata.rda
491e2d53c3bdf12792b9bebc04aaaff3 *inst/extdata/00simer_logo/simer_logo.png
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/01bigmemory/demo
7445712a111d81e224e8f4fa8dae63df *inst/extdata/01bigmemory/demo.geno.bin
b92d9b9ba2ea4dce8d79d21820a9fbdc *inst/extdata/01bigmemory/demo.geno.desc
0d97ac43c29d157123771fadae1f2d74 *inst/extdata/01bigmemory/demo.geno.ind
7376e2c92391ee3296755782a1e8e896 *inst/extdata/01bigmemory/demo.geno.map
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/02plinkb/demo
d771b04a93e4ab5c3957bbf8205bb283 *inst/extdata/02plinkb/demo.bed
189dfb735835566b801d46c4b85b23f4 *inst/extdata/02plinkb/demo.bim
57f53bdbe51681efe20eaf221c8bff11 *inst/extdata/02plinkb/demo.fam
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/03plinkp/demo
235aa66846791be6eea41ab4ef3212c4 *inst/extdata/03plinkp/demo.map
f1b73b213f8d831cd9e532a513baeadc *inst/extdata/03plinkp/demo.ped
77c14b6fd2f7ebfaa2941178095f9cfa *inst/extdata/04breeding_plan/plan1.json
312f6ff55a674a2db96ccb9231b5c8a5 *inst/extdata/05others/pedigree.txt
a8d7544661a501c55c00592e134f2a2d *inst/extdata/05others/phenotype.txt
8d39bbc3d9c63ac07daffcbf5044f80f *inst/extdata/06map/arabidopsis_map.txt
3876b8eb83e39cf144e7c62444002440 *inst/extdata/06map/cattle_map.txt
d4ef9eed54336b7d810525327293a86d *inst/extdata/06map/chicken_map.txt
7892979b9ae2d3822dc39b4af601f73c *inst/extdata/06map/dog_map.txt
259de2f6b2f5d97a6cbb2e04966fb8c9 *inst/extdata/06map/horse_map.txt
dd3ed370d02a489044674c688029ec09 *inst/extdata/06map/human_map.txt
df4a33b07298536c0eefca6c693961ee *inst/extdata/06map/maize_map.txt
e975f9d20771ffb84e440a49b0362f91 *inst/extdata/06map/mice_map.txt
997602321c041246fccd5a12ea826536 *inst/extdata/06map/pig_map.txt
710c0b7e21d3074607a7584ee37431af *inst/extdata/06map/rice_map.txt
bc24a0c145e6cec6092dd05fd5928807 *man/GxG.network.Rd
59d1ff8fa4ad447120a2653249bb92af *man/IndPerGen.Rd
9974fc80655187511dbc3a2456b28383 *man/annotation.Rd
3570e1b9294275611b7a48fcc3f9e87a *man/bigt.Rd
3e3af31dfe41d24c6045a44a447bac11 *man/build.cov.Rd
182699ee0f2922c2fe065ff47cbbac6f *man/cal.eff.Rd
1f0567ef03ee32e31eda086c2f69b281 *man/checkEnv.Rd
eec61280031c5afd116437c2c09abba0 *man/format_time.Rd
49abefd0491720cb6ccdd0d07350d696 *man/generate.map.Rd
215c219390fbee64ab9f261d81b23256 *man/generate.pop.Rd
0c46b3b83f19cc5b2c6783f37555c657 *man/geno.cvt1.Rd
9c5fba9b281133d1fc2e598ef3023f0d *man/geno.cvt2.Rd
87ca64cbb6d386ac374f70f4f5a40a17 *man/genotype.Rd
cdb6e6d6c242f06a6d2b91908c77eae7 *man/getfam.Rd
1d157b10b3b55843e38aa7bb663cb87f *man/load_if_installed.Rd
5353cdef132cf67f83ce0239fe11106c *man/logging.initialize.Rd
8dc3f7b141e40a69ee7db7b4efdfffde *man/logging.log.Rd
7e10de506f9036bccf48fb5920c3b1fe *man/logging.print.Rd
c2f11505339fef978a9211fd28f1f7ca *man/make_line.Rd
15cd8489105f34521ec0453653ef4fa0 *man/mate.2waycro.Rd
03af899256272b2aca1b245f4a26af40 *man/mate.3waycro.Rd
32cfc43f86f82ddf8c4fed17144fe5de *man/mate.4waycro.Rd
ad8996eb3a7bafdfbc1a21d6a784c6a0 *man/mate.Rd
c0e875bed1819a30db8a6b1ad95a32e6 *man/mate.assort.Rd
d3a57beddb121ce57a5a274339edb4dd *man/mate.backcro.Rd
419dc106e6826b222e3a41a54d7ee281 *man/mate.clone.Rd
fa4e3a836f70096c5ba2f20327126b64 *man/mate.dh.Rd
3ccc01ddd7553e9413339f388b4f065c *man/mate.disassort.Rd
e7542a0da2ec94919fb9deeac961665a *man/mate.randexself.Rd
d68283019cd9874e6b3b2e8bd42fce62 *man/mate.randmate.Rd
e5abc16704f29d316ea8516548fdada9 *man/mate.selfpol.Rd
05da61541e333835c514966f9f3a8c7d *man/mate.userped.Rd
a5f45afd059629183f26f0ab8b3b785c *man/mkl_env.Rd
66435ba59059e5800fcea22e498a93a1 *man/param.annot.Rd
d7e028b89a9f37dcdce32f823a86d263 *man/param.geno.Rd
859cfced20a8058a29f8765d111b074a *man/param.global.Rd
6b8b64b826a9d8544aa8a1020bdcf126 *man/param.pheno.Rd
18cb6a26be78fc0ececcaa43b4531b9d *man/param.reprod.Rd
955d7e8029f421bb714cc3a18ee95b7d *man/param.sel.Rd
c8f4bcc5d46b8b08208e505dd24c7464 *man/param.simer.Rd
8ff45d6e3fcbd5901840056385da4620 *man/paste_label.Rd
5cfcb9b91bdb640003178841330ee745 *man/phenotype.Rd
798e53d90cfd72284e96a15288f1ed59 *man/pop.geno.Rd
34292bce8796fd2fc16e2cbd5f16e060 *man/pop.map.Rd
5eb237b43adbafda25435c6ebd89a37d *man/print_accomplished.Rd
2d12ae1b287724db7211147772d863c6 *man/print_bar.Rd
58c680fd204e0f01d05981da583fa71e *man/print_info.Rd
001cc9650d6b0a1264d6c3d16dcaa654 *man/remove_bigmatrix.Rd
ba6ef508a6c4e7dde3cc6767cbcb7c85 *man/reproduces.Rd
d2bb42605522e97364a95e8b896c4e32 *man/rule_wrap.Rd
2647283db72f5a710f472e444477c530 *man/selects.Rd
c3ce06e8ebeeb927e36fd0cc34e7982d *man/simer.Data.Bfile2MVP.Rd
e42319710499fbef452806e610fb5249 *man/simer.Data.Env.Rd
e0833059a5c3acf2448441c607c24c9d *man/simer.Data.Geno.Rd
fd3408a79c0f1b4c223e2187f9c64aa1 *man/simer.Data.Impute.Rd
10be443d8b1a6c1a618560ccc2c492cd *man/simer.Data.Json.Rd
d58ead8e1379be4e0b6afc8a06fe90ed *man/simer.Data.MVP2Bfile.Rd
716b44b7e8b5e747b4ac04d89d9516c7 *man/simer.Data.MVP2MVP.Rd
5f59a5898dc4389613da92fdd2c3e484 *man/simer.Data.Map.Rd
0e32b8775c0aeb4e3dfd551889d6a8b3 *man/simer.Data.Ped.Rd
5c92fbc1987d2e6cdb29145290283f17 *man/simer.Data.Pheno.Rd
bd80373011b19421d6906f198b2185ad *man/simer.Data.Rd
41bc62aa515a69d2b3dfaa2421cbb85b *man/simer.Data.SELIND.Rd
42069f45d04fe2addad7d631ffd11b2b *man/simer.Data.cHIBLUP.Rd
ddd23144fa40ace469a679a539c7ce9f *man/simer.Rd
8a98acdc31388f77683617853663ddb4 *man/simer.Version.Rd
ca632b40f2715a77c3f707df4cef0665 *man/write.file.Rd
519947cdd03691309d052fa8bcbeea2b *src/Makevars
519947cdd03691309d052fa8bcbeea2b *src/Makevars.win
5ca0af15cd01dfccea058a3079fc9cae *src/RcppExports.cpp
94b138b9ffcdeb3fa347c4f1547054f6 *src/data_converter.cpp
60729d2bdd07cf65b9b09965e44c42b0 *src/genotype.cpp
1bc599b057efe4f780d4bde63111d2f3 *src/impute.cpp
fe3bb7746f5564baf99a8dd5810bc0c0 *src/pedigree.cpp
f175d81e98dfb6f8d33a0328b65d6582 *src/simer.h
81493aa3d547b67fa616c6d4ac3f491f *src/simer_omp.h
