01c902d9f0d3421be80e1d5023716ce0 *DESCRIPTION
9a58bc388a79915766204a9775160b75 *NAMESPACE
cf1ec6f8d1884654f8540ca681324ddd *R/RcppExports.R
bbe8bdddb374fff79e250a75fd2b5709 *R/exports.R
54467694738c51b0a5f89b1109efc8a5 *R/simdata.R
e223077322d410f434454a94c46fd17b *R/simer.Data.R
57394765dbf625892c03376f4470e2ac *R/simer.Genotype.r
06656d0070b309ab2cb2c0085b1b5b52 *R/simer.Logging.R
b9fa39ba832894dc005cc029d2c20b83 *R/simer.Parameter.r
765c845d8934eaea6b4030b488a0fa02 *R/simer.Phenotype.r
d89c2bc2217b0b7c6a43b69307b0f082 *R/simer.Reproduces.r
b2a75bdabae4d9dbad78a1e64fdda99d *R/simer.Selects.r
f9a3ecb55474168efd567493ad3a7ac1 *R/simer.Utility.R
f585e774a518efb39d974aa29027e45c *R/simer.r
e421c495fefbcafdf6e7f81dad7a12e3 *R/zzz.R
801093fe893df88c4423bf4fd02b7663 *README.md
b16fe85e90eaea037664a41b3a8b298d *data/datalist
97b71194d1c6baba8c6cbd75f86d3c13 *data/simdata.rda
491e2d53c3bdf12792b9bebc04aaaff3 *inst/extdata/00simer_logo/simer_logo.png
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/01bigmemory/demo
6073c17cb39085cdf83ce9755d23627b *inst/extdata/01bigmemory/demo.geno.bin
232ba3fe647d564c3f5464495d3eaa72 *inst/extdata/01bigmemory/demo.geno.desc
0d97ac43c29d157123771fadae1f2d74 *inst/extdata/01bigmemory/demo.geno.ind
7376e2c92391ee3296755782a1e8e896 *inst/extdata/01bigmemory/demo.geno.map
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/02plinkb/demo
d771b04a93e4ab5c3957bbf8205bb283 *inst/extdata/02plinkb/demo.bed
189dfb735835566b801d46c4b85b23f4 *inst/extdata/02plinkb/demo.bim
57f53bdbe51681efe20eaf221c8bff11 *inst/extdata/02plinkb/demo.fam
0f81c9d0da42750f4e97f794b679dc2f *inst/extdata/03plinkp/demo
235aa66846791be6eea41ab4ef3212c4 *inst/extdata/03plinkp/demo.map
f1b73b213f8d831cd9e532a513baeadc *inst/extdata/03plinkp/demo.ped
77c14b6fd2f7ebfaa2941178095f9cfa *inst/extdata/04breeding_plan/plan1.json
312f6ff55a674a2db96ccb9231b5c8a5 *inst/extdata/05others/pedigree.txt
a8d7544661a501c55c00592e134f2a2d *inst/extdata/05others/phenotype.txt
8d39bbc3d9c63ac07daffcbf5044f80f *inst/extdata/06map/arabidopsis_map.txt
3876b8eb83e39cf144e7c62444002440 *inst/extdata/06map/cattle_map.txt
d4ef9eed54336b7d810525327293a86d *inst/extdata/06map/chicken_map.txt
7892979b9ae2d3822dc39b4af601f73c *inst/extdata/06map/dog_map.txt
259de2f6b2f5d97a6cbb2e04966fb8c9 *inst/extdata/06map/horse_map.txt
dd3ed370d02a489044674c688029ec09 *inst/extdata/06map/human_map.txt
df4a33b07298536c0eefca6c693961ee *inst/extdata/06map/maize_map.txt
e975f9d20771ffb84e440a49b0362f91 *inst/extdata/06map/mice_map.txt
997602321c041246fccd5a12ea826536 *inst/extdata/06map/pig_map.txt
710c0b7e21d3074607a7584ee37431af *inst/extdata/06map/rice_map.txt
90e0e7890f1946445c8d9b0cff5f8b03 *man/GxG.network.Rd
9855bc12087e458f3ab22068361439c5 *man/IndPerGen.Rd
e5a591aeb4b53a3388f57ed0c16e8512 *man/annotation.Rd
07e3fbe9a0d654003549268b3af0c7bb *man/build.cov.Rd
ea7a9c9ce1770da77623805bf55cf0c5 *man/cal.eff.Rd
18fe484e7095c4978e13de84c8cf4a86 *man/checkEnv.Rd
2564070e415927f02bea6227a760b2e7 *man/format_time.Rd
320b3614bfc82616a8c609a9fb0fa974 *man/generate.map.Rd
883eb9793b37134a56854fe9808a8386 *man/generate.pop.Rd
7de86e2be0bc7a12137918df7d545faa *man/geno.cvt1.Rd
006961043aebcbc3ef4aa73be078beca *man/geno.cvt2.Rd
04033872c25203c94beec55b84a1153f *man/genotype.Rd
76f681ff69e91f6f8a413614f92dd25f *man/getfam.Rd
8212fbc14a4ef09b919b75c6ac404d1c *man/load_if_installed.Rd
b751d0b9d50c57c0258c286866a06e97 *man/logging.initialize.Rd
42179b3c8ab9457dc6c6bb80fcbe796a *man/logging.log.Rd
69ecb1d618d48cec704e33c00429aadc *man/logging.print.Rd
17a2c43a12788a2be129f1ebbb468620 *man/make_line.Rd
de863336f7436f49a81a4c2391965ef2 *man/mate.2waycro.Rd
e08deac482457c8dbcd8ef70deba560a *man/mate.3waycro.Rd
1ed491f29443c3f3d9d58d3c59f624f8 *man/mate.4waycro.Rd
2c84eebdb4771b05bab01cced3d03454 *man/mate.Rd
ffc42546340208b7aa1acec45ec3131f *man/mate.assort.Rd
97e9c2788888ebf02d21a6f9168e3f16 *man/mate.backcro.Rd
96cc875a310639b49ea720195ea0ac24 *man/mate.clone.Rd
da5b575c89c9bfb7853c83f371d26e29 *man/mate.dh.Rd
d4c75079c0d851fbe34e16059aafd46a *man/mate.disassort.Rd
5ded54403b3edbfda93b3cb5a894fd60 *man/mate.randexself.Rd
08d9f9fc4b8e59ca62afffb79996f3b9 *man/mate.randmate.Rd
ccbf47333e84c1b99146a1937698c7e1 *man/mate.selfpol.Rd
9f7cb28a04286fd1133a048a6401ac36 *man/mate.userped.Rd
82a61d009656e89e8c715520b10fffb5 *man/mkl_env.Rd
065e3e63848d7d50aac1c4eb5d60108f *man/param.annot.Rd
eec2341d6adbefccd1a54555718588c3 *man/param.geno.Rd
dbe88ed7a1051773ff0ff8b8c3e81fac *man/param.global.Rd
72a803760c08a0d70f4de80f4b571634 *man/param.pheno.Rd
83d31b91f3b522359199c8cb94a61627 *man/param.reprod.Rd
a4efc08b0e3da777b2edb2a8b339bb2f *man/param.sel.Rd
8a45162731c384cf804b9fb1f0653873 *man/param.simer.Rd
ebd0ff23771b0136b312456bb0353b75 *man/paste_label.Rd
1a8de7441b3a41b1ffb81e3e03052bd4 *man/phenotype.Rd
85a61efd071b32e5700ea0f7c8ba279b *man/pop.geno.Rd
720ab1f7505ec874c3038f99b660cee1 *man/pop.map.Rd
4c39a42c5a10fc07523d050001f6464a *man/print_accomplished.Rd
9f9b17eee52a596babe06025e0d1fd0b *man/print_bar.Rd
a69504776fca63f800c8a927399e62ac *man/print_info.Rd
68baaa669b261a446094f7d4b510edc6 *man/remove_bigmatrix.Rd
d1f3e5e3ca6fae2bfc96e86570b993ee *man/reproduces.Rd
71c169244f2880943d4954d28679d1c6 *man/rule_wrap.Rd
3ec9ff5b902389928577c86740ff459e *man/selects.Rd
b36f6b1235cdf95412e02da6dfcc1ecd *man/simer.Data.Bfile2MVP.Rd
9c865669e32a3258060f8158ec1c00bb *man/simer.Data.Env.Rd
5ab1ad29a565c4138cd96112bccb266f *man/simer.Data.Geno.Rd
b2d36a9d1dc7306c3dbef2813e79480d *man/simer.Data.Impute.Rd
87e1d75a2ecfbee0c958533b5168784a *man/simer.Data.Json.Rd
ec7b08e3a48d4c9cd8a5dba65b3918d5 *man/simer.Data.Kin.Rd
db70b8aded99014da1c31cf6a838fce2 *man/simer.Data.MVP2Bfile.Rd
09adc62cb7530efbd1c0bfffc8ecde3f *man/simer.Data.MVP2MVP.Rd
cd909f398d1a447ce786dd9ea13294b7 *man/simer.Data.Map.Rd
b149f497550f260821ede4eaf0bad44a *man/simer.Data.Ped.Rd
544da995bd1e791474090fdaecae675d *man/simer.Data.Pheno.Rd
d516e51722849ad673d7aca0ce6dc45c *man/simer.Data.Rd
4ef4ffa7da5326d720fdd8b83b7e0d5a *man/simer.Data.SELIND.Rd
0949f66029b65b13b497551941ec4664 *man/simer.Data.cHIBLUP.Rd
2fb472ba95b4d2d51bf261e005dc173c *man/simer.Rd
51b2a7f48d6b59d2c2ec4bb81ed0b30b *man/simer.Version.Rd
e147032c03e4e13bf798b18c63278279 *man/write.file.Rd
91f3d5d3f3aa2e9211eee740eda9fa41 *src/Makevars
91f3d5d3f3aa2e9211eee740eda9fa41 *src/Makevars.win
b262df04172403e4b802c6fbe27f7a6f *src/MinimalProgressBar.h
b0cf4494940287a53912b90da6c93682 *src/RcppExports.cpp
f2c4497d76d6599ba6a03022109858c5 *src/data_converter.cpp
8b5d6dafa74d1285f1c3617f532a4cf6 *src/emma.cpp
93b17fc4223631e63b8502678226767e *src/genotype.cpp
2121ccd756fe15379dcb8751974f0579 *src/impute.cpp
a8d662df9522b49b7736020cb2c96fa7 *src/pedigree.cpp
62195e44c6cc831fa3cd42f5e8ee6574 *src/simer_omp.h
