8c8931e954198e2048dca51cb6861b61 *DESCRIPTION
69d0de933e40bc432e96576d5a7bbac6 *NAMESPACE
6e60eee04558f99f6fe64c7cbd14a6c7 *NEWS
c9ea3cf4be143eb2c02e44c3221c63dc *R/BARRIEL.R
32b62e53b737044422cf1748ef5eff40 *R/FIFTH.R
9bda2ca4612f5e7ba194a29b97489797 *R/FilterHaplo.R
51a19d76db87c905e95cea367cdff5cf *R/FindHaplo.R
e893dc699f837c34d101a1ca88a55d37 *R/GetHaplo.R
57e8718a3e8a3a45ea5bede0f7d7a51e *R/HapPerPop.R
38baccfd9cffd6662a76d496eba2110d *R/MCIC.R
01a22e3301b831a22f1cf515d7230192 *R/NINA.thr.R
386c77ec4738d99113169c669a80f781 *R/SIC.R
8c0fe0f7fbea784faa6fe9ec088891ad *R/barcode.gap.R
42e98eb2c2c25da6cc255b75741aca50 *R/barcode.quality.R
8dcedf184dea978c8ed2f2ccd4d0a0a8 *R/barcode.summary.R
01224d521741b8d20259429cd408dfb5 *R/colour.scheme.R
3c8435fe923958534ff55eb6b921ea18 *R/compare.dist.R
0c241d9d86699c0dd49a34ea6a00ab71 *R/distance.comb.R
f807d65bcfd0d833c5c68a5960dcada8 *R/double.plot.R
70ee45931daa1a347884ca68a61971c2 *R/genbank.sp.names.r
2223c4755c9c83299975c423e2a6433f *R/inter.intra.plot.R
efe0480ec8d7873e3d16f81b1592ecaf *R/mergeNodes.R
8a5304c6bd788ead7bfdab449f1cc159 *R/mutation.network.R
d8bebd7209562e3d18618b3044b09b60 *R/mutationSummary.R
5148056729d2ab5cbdeb6a84c2dc4f4e *R/nt.gap.comb.R
1b8a3d19920996302c975fb065873035 *R/perc.thr.R
9767182750cf3751997a384f81ec7d71 *R/pie.network.R
f258095c6a101e7d6805bc9dede81024 *R/pop.dist.R
b61fc38a8751b5a02ea21a4b48e63244 *R/rule.R
d9c8084e014aa64b276ae5fe7cf43f22 *R/simplify.network.R
cda9e68cc5e1beb51af82df445000fe9 *R/simuEvolution.R
1ec918649565a115ef1f032b30a9e32d *R/single.network.R
29550af4de89cc537223f28ee4d6856c *R/single.network.module.R
7190deab7b1885e9dc7109e93a7a430f *R/spatial.plot.R
613fdbc6708fe116f94faac7d84e792a *R/zero.thr.R
463ee712d3be151aecc85cafc1b0e2c5 *data/Example_Spatial.plot_Alignment.txt.gz
d0fe3215091811496faa765b2485dcd3 *data/ex_Coords.txt.gz
fd4026e3179f286c4fee5dada0f20740 *data/ex_alignment1.rda
4722ecccea854901c24aa9f139a8408b *inst/CITATION
eeced28a62eea1966347ffe1970e4227 *man/BARRIEL.Rd
354713152bc5c48a3ee1841ae16f03b4 *man/Example_Spatial.plot_Alignment.Rd
a71dbfe70d5bb04fbc2bd934b8859886 *man/FIFTH.Rd
5f73d82118b0e9c9072990c11e979573 *man/FilterHaplo.Rd
9c88fc51dc1eea617da5d6baedadacf0 *man/FindHaplo.Rd
71135af2fa67fc7dfc488051f175dfaa *man/GetHaplo.Rd
0831e31887fe19daa2bb662669ce1806 *man/HapPerPop.Rd
64b4c21ce516d537f9498847a4bbd3fc *man/MCIC.Rd
46e8c3a703326c3cf97ac56da1fdb2fd *man/NINA.thr.Rd
5ee8e9283d1cfed8443b60572c183f22 *man/SIC.Rd
87546425ce864d9c5d355fa0fc92e2ad *man/alignExample.Rd
87e20c2ee59e23eace7f38ff7dff6e7f *man/barcode.gap.Rd
457bb05cad45f06d260534dd69a80760 *man/barcode.quality.Rd
8e458cd78990a6b4557fad531014e8f3 *man/barcode.summary.Rd
2e67d486948a61665669eec133f1af6b *man/colour.scheme.Rd
5fc304445f0a52d12f8f73d20a567a3f *man/compare.dist.Rd
e447cb903fe99b491d78e91aa7cb0d21 *man/distance.comb.Rd
b593d718326584e7ab2d1f45d09e0ae4 *man/double.plot.Rd
89a1067d3a1403c8c5368b656f7b5874 *man/ex_Coords.Rd
659ea75e6d521f86b3c6020fe43a0cb3 *man/ex_alignment1.Rd
e6d8b4df645da3c61aabada1ddf4d73a *man/genbank.sp.names.Rd
f998e7db80ade17d8b3188e19cd8a94f *man/inter.intra.plot.Rd
99b21f612b1cb4dd402d40bd04b27c28 *man/mergeNodes.Rd
9475b94b16401509f114280ebcea5c5a *man/mutation.network.Rd
ca6358b5d7c00607648b35c027d8b6c1 *man/mutationSummary.Rd
98e30642e342c0d53c9a7249ffe460d4 *man/nt.gap.comb.Rd
79a0fabb40ef2f7c1de1efd7ba143696 *man/perc.thr.Rd
b686ef9dd6ac3fad41e45be7c2a48f98 *man/pie.network.Rd
a606d8ad6be893478f210076e48d6592 *man/pop.dist.Rd
4c59e980f81f82b3a6c0193d849009be *man/rule.Rd
8711cb88c131b8f31b769d73b010c9fe *man/sidier-package.Rd
f74de0dc75f1e1c5e550d0fc099f6c73 *man/simplify.network.Rd
52f560a4e241b00e2c0f5c34da199ee0 *man/simuEvolution.Rd
8fb865c982c6cb109936d4930e389e87 *man/single.network.Rd
f734e4244fc9e2e90367ab8f93e090a0 *man/single.network.module.Rd
00365a3dd346b757ffeee8bb6532b5cd *man/spatial.plot.Rd
295fdec99d4fbe951485236a41310a22 *man/zero.thr.Rd
