ca759c9de9001bbe6c86e48bf1d3ffe0 *DESCRIPTION
e1632bbfe5746b9b7ec109262caad801 *NAMESPACE
a31dca87af8e5479522768b8aea12c1d *R/CsgA.R
d4384e68c1c0d7f357eb43874f452cf4 *R/RcppExports.R
63f5680b99f8ae8c6c7e0ec48a943894 *R/atomic_validators.R
7c995f453db408a93987059aea235f81 *R/common.R
e6714f26a27d7fb7cb90aa2f00b3308c *R/count_kmers.R
cc980d7d82439d9fa282691fc790eb13 *R/count_multimers.R
92cd10680b8de5793845557fadb309d1 *R/kmer_functions_provider.R
0068dbeae58500f3e280b138953ad533 *R/kmer_typed_functions.R
0dfe97a3d8736fd9a2401ce87f24274a *R/package.R
ab11bb69a08ba427ebd8b68802bc9a68 *R/seqR_result.R
c8ed5ed09e3f95684065ac2a22a251f0 *R/zzz.R
1d3e501830de7e85f6a040b351edc8b9 *README.md
77ab4dabae00ec4049ee588c4ad7c903 *build/vignette.rds
c3cded853a2388ad53569a7105d1c1e3 *cleanup
2026a6bbd3c047aa7ec927181789bd13 *configure
778e936e70058d312783555528d3473c *configure.ac
83468905d53e6af8527e5cfc8bba6936 *data/CsgA.rda
6a6d89a8161dc2d2e346cd048b32d665 *inst/CITATION
ccc02b22f28dd17b6326d2d6dd1ae86c *inst/WORDLIST
55a0237ed554f8948aa8c5f2d73fe8f6 *inst/doc/features-overview.R
1d6841b622a6fb24280538dcd5b23946 *inst/doc/features-overview.Rmd
37424bb5add2e1607a8568b4f773ad54 *inst/doc/features-overview.html
5124508a31b9eea85f2a125a201e770a *inst/thirdparty/dictionaries/robin_hood_martinus.h
c11e580fa4704b855fb435accb3d0048 *man/CsgA.Rd
0c37e5bd948df560b3b437abbdbcac5f *man/count_kmers.Rd
b78a23e6f1ea706e8068c090f5b18ca9 *man/count_multimers.Rd
773b4b0da9bf13c99dfbbbe5a91bd36f *man/img/convert.sh
9c22d58256cea69b5c78401ea419ee30 *man/img/gapped_kmers_changing_the_first_contiguous_part.png
f898ddebe47cedbf8cb130fc79c137e7 *man/img/gapped_kmers_changing_the_first_gap.png
5f99c5337198d11f72b5549923859d08 *man/img/packages_different_k.png
0fb7e87f3e5530ddd57ca94fa54b42b2 *man/img/packages_different_seq_num.png
96da564c84a54b20413119a43e9829e6 *man/rbind_columnwise.Rd
27314f5a8c8e7bd502dad03a4e30af20 *man/seqR-package.Rd
096105cae041613f70ddb4bfb0f7270e *src/Makevars.in
59aecffed80a2fa241c4c7d660ae7bab *src/Makevars.win
043ea264c84f70ba97789888dc6b9a4e *src/RcppExports.cpp
b5d077f2f2417989ebe6402e68a86580 *src/common_config.h
ddf438fd1fcda2153b5e7ebaa627ac68 *src/contiguous_kmer_counter.h
8b485af1588c0a49720be48715448911 *src/count_kmers_specific/count_kmers_specific.h
8883033fd015bc144b421022eab6f7fa *src/count_kmers_specific/count_kmers_string_list.h
8eb849b68dfe5e07fc6f5163f43c9058 *src/count_kmers_specific/count_kmers_string_vector.h
f153ea76a0e30aa0ae2c428b9de22dab *src/count_kmers_specific/encoded_sequence/encoded_sequence_proxy.h
7857bc2ef75247387a953142b3780bce *src/count_kmers_specific/encoded_sequence/raw_encoded_sequences_list.h
a05e2a648a1df48211db2259e815be20 *src/gapped_kmer_counter.h
a05d94903b72e984f9009992ddebe14a *src/hash/complex_hasher.h
a10efd665de15720cf3e75ba7b03fd56 *src/hash/custom_vector_hasher.h
9d48cddca5821a24ab36279fbbb8ed96 *src/hash/globals.h
bdcbcb767964284cbfce99bb5720341d *src/hash/polynomial_single_hasher.h
a5b46301df7098ab28dd5b2a9f1dcfb1 *src/hash/prefix_sequence_polynomial_hasher.h
a9a6b931f5e7a27beef80030a11dc826 *src/hash/rolling_window.h
ef5942a09017088a0f3dcb05648d5710 *src/hash/single_hasher.h
8010a6deaf8ba31bdb001b95e2ac51cf *src/kmer_counting_result.h
cfb6b35316c5fb2781358171c937257b *src/kmer_manager.h
dd71ea428eb72b2f9b5f00e0aa1c3c9f *src/kmer_strings_creator.h
1d093aa126d06d123adaaa29b53b8ef7 *src/kmer_task_config.h
a96a39f92d9cbfbb843580b575faa42a *src/kmer_task_param_dispatcher.h
d560c044a4ea88defd12df8eb6df65e1 *src/kmer_task_solver.h
9bb73a7068af2da652e2eb6a85b37cd6 *src/proxy.cpp
c07690257754b785321b5f897d4c7b13 *src/proxy_contiguous_kmers.h
901b1c69f7bba6af0ec2c54f1350c97a *src/proxy_gapped_kmers.h
f3c2c75f3a4189ebc9f783995590f128 *src/proxy_merge_kmer_results.h
8429028664cabd3b2c603a0b27270da5 *src/user_params.h
0059d33e93ab9d3d919768d4998daa46 *src/utils.h
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
f6eb5934bcec09e36695a6a7e7007b57 *tests/testthat.R
2321e8547ef6b4bfc45e570ab5ff5716 *tests/testthat/test_count_gapped_kmers.R
9b13a881ac8438c63770f38cdb712d68 *tests/testthat/test_count_kmers_multidim_hash.R
e4eb76c77401263c44cb100f7ac7525b *tests/testthat/test_count_kmers_multiple_seq.R
c2a916b42a6b9fc8f42a4676f31c66b6 *tests/testthat/test_count_kmers_proxy.R
4e16ad918b138d4cfea3db5347e5b400 *tests/testthat/test_count_kmers_string_list_single_seq.R
9aa8801ad98892b4e177940d7280dbfb *tests/testthat/test_count_kmers_string_vector.R
fa5b3d0ed65fd5395de214130e7b4dd4 *tests/testthat/test_count_multimers.R
c13d08d41ce7ffa4c5213715fe36d4dc *tests/testthat/test_rbind_res.R
460ddf9da9e80208511829772c78b93f *tests/testthat/utils.R
1d6841b622a6fb24280538dcd5b23946 *vignettes/features-overview.Rmd
