Package: seqR
Type: Package
Title: Fast and Comprehensive K-Mer Counting Package
Version: 1.0.1
Date: 2021-09-27
Authors@R: c(
    person(given = "Jadwiga",
           family = "Słowik",
           role = c("aut", "cre"),
           email = "jadwiga.slowik5@gmail.com",
           comment = c(ORCID = "0000-0003-3466-8933")),
    person(given = "Michał",
           family = "Burdukiewicz",
           role = c("ths"),
           email = "michalburdukiewicz@gmail.com", 
           comment = c(ORCID = "0000-0001-8926-582X"))
    )
Description: A fast implementation of k-mer (subsequences of length k) counting with the support for all types of biological sequences and k-mer variants.
License: GPL (>= 3)
Imports: Matrix, Rcpp (>= 1.0.4), RcppParallel (>= 5.1.2), rlang, slam
Depends: R(>= 3.6)
LinkingTo: Rcpp, RcppParallel
Suggests: covr, ggplot2, knitr, microbenchmark, pryr, rmarkdown,
        spelling, testthat
VignetteBuilder: knitr
SystemRequirements: c++17, GNU make
NeedsCompilation: yes
RoxygenNote: 7.1.1
Encoding: UTF-8
Language: en-US
URL: https://github.com/slowikj/seqR
BugReports: https://github.com/slowikj/seqR/issues
LazyData: TRUE
Collate: 'CsgA.R' 'RcppExports.R' 'atomic_validators.R' 'common.R'
        'seqR_result.R' 'kmer_typed_functions.R'
        'kmer_functions_provider.R' 'count_kmers.R' 'count_multimers.R'
        'package.R' 'zzz.R'
Packaged: 2021-09-27 16:48:12 UTC; slowik
Author: Jadwiga Słowik [aut, cre] (<https://orcid.org/0000-0003-3466-8933>),
  Michał Burdukiewicz [ths] (<https://orcid.org/0000-0001-8926-582X>)
Maintainer: Jadwiga Słowik <jadwiga.slowik5@gmail.com>
Repository: CRAN
Date/Publication: 2021-10-05 23:20:13 UTC
