0fb69290853cef0382f748a6a456ac5b *DESCRIPTION
b6d37afc6c31568be8c9ff8847a55f7b *NAMESPACE
bc8d74e34f3ed25fd5335549ed56fcc0 *NEWS.md
2c04cbc6d2ce73496288b44c38c88f6c *R/Nancestors.R
edebdd1e1f9268f278da7b163560dc05 *R/Ne.R
b17fdc767473467d4981e680460b2481 *R/RcppExports.R
cd2442b63465f1f858b6f102e129bcd7 *R/check.R
128415e5c7417f8e2e36fccb2c10f3fd *R/clean.R
5d9d0d47d934401cb36b9b4c9219952f *R/data.R
1e59c3896f94e05cbf6dae525d8bee97 *R/expected.R
050fa88dcf21091268b1f8c02e546b57 *R/fitness.R
31c38ce8e9420aed2c867760a624ace2 *R/generations.R
49a397aa3e79bc6feda491a05166b223 *R/inbreeding.R
d80ca58a83dcbf5ac3eb7c1c308a4c90 *R/maternal.R
55543017139130c861d6c3011cd8ea62 *R/mating.R
27c676f9766d6efe1f2f9891e2c44844 *R/opurging.R
ab317f6e4167f1b2464e0c962f71439a *R/partial.R
b4d28923df454522a49f2960c27c16a2 *R/purgeR.R
603b09efddc3a668fe3f442210b3560e *R/rename.R
08d41b02a4f54d4553ca85a3d6908507 *R/sort.R
d8038bd6a7adc56e4efac0760b25bf0b *R/zzz.R
1a630f7d8c1b1943cd2e3d05842aa702 *build/vignette.rds
fdef128dec15a7199c4fb57e7fff401b *data/arrui.rda
a1ffdae0387af57b35b744acf509d9ce *data/atlas.rda
67c13d1ba5f278a3518c5cf288b45a3d *data/dama.rda
25a393c60520ed31fb8745eaaab324a2 *data/darwin.rda
c031559e03744028582c24e908207c71 *data/datalist
2f161764984dd3b926f74c113c88b273 *data/dorcas.rda
5cd5953b938571a3548cd8504443f092 *inst/CITATION
4f396791cba6add477d7f518e5ead81e *inst/doc/ip.R
dc4208c95b34467f8155d365a01f12e1 *inst/doc/ip.Rmd
1f6b584e4803a3c00fee7e1396a8317b *inst/doc/ip.html
2ab18905c5daaa3d8e14f854e30cf4dd *inst/doc/purgeR-tutorial.R
3dea99f73d019ecce9b14f0004c3301b *inst/doc/purgeR-tutorial.Rmd
2671448f6d2ee6fcd4986b599ad78d6a *inst/doc/purgeR-tutorial.html
1025cd19d319e75a50dbe15a6bfab007 *inst/extdata/arrui_op.rda
428746397ef970bfe66984b006638c33 *inst/extdata/dama_rv.rda
75ad4987e8551ff6ef1919b4e57d8709 *inst/extdata/pim.rda
68639712595992ac721006c4ba603859 *inst/extdata/posterior.rda
bf744df0c7f3ae94286a7535ff59e7f1 *man/F.Rd
e2b8548a5dd54dbf8e0391e2d7aa8f98 *man/Fa.Rd
dff2ef32b14442cc66d602906fc0e349 *man/Fij_core.Rd
0683709452b21aaac2af02290e50b0ed *man/Fij_core_i_cpp.Rd
f542d57d03ae99f00b01291004d985ac *man/Ne_delta.Rd
56a0fe0e21773152b8f9cc37be494e3a *man/ancestors.Rd
58f27e11f38811e34f2b366a1105ee48 *man/arrui.Rd
07a28965935b1aced8102af200af0497 *man/atlas.Rd
ed95a821314178a8acb6ca3fa329a08b *man/check_Fcol.Rd
c13a03b1af7774a01574896a63acbeab *man/check_Ne.Rd
a917e2b6c0628cb3889ad6d4437950bf *man/check_ancestors.Rd
e50c2037fc2b18dc8a78762ce12c33cd *man/check_basic.Rd
2ec0d2377408ab9175f44d8e85d1b67e *man/check_bool.Rd
23f288e1fb4ee4eca8f5bd0a7bfa5bd1 *man/check_col.Rd
1229f5678386147dd45fc206dab60030 *man/check_d.Rd
15ccbb960a6abfce7f0ec4d4c1fc8550 *man/check_df.Rd
edeb926c3cb022dd8e064bc933169222 *man/check_index.Rd
033c77c7700a9ad4f92be2573bfad532 *man/check_int.Rd
4ae51b34e288236b8c434c4b991ef0c8 *man/check_length.Rd
d57607ac84b2ffc407326e4eaa767f98 *man/check_na.Rd
eb1d7d78aea32767d6628bf2b3352dc1 *man/check_names.Rd
4d7ec8b829cd219463ff92ea11455dcf *man/check_not_col.Rd
644b02d9e3bd7c8d3759e9bbe9548c82 *man/check_nrows.Rd
c71575fbe5f20e69668cd5e239d98421 *man/check_order.Rd
9e4920bcf859dde0f6a43643dac9c713 *man/check_reference.Rd
d32c3ebb4e8ca56aafef539e8742d342 *man/check_repeat_id.Rd
0084c2b5ef02f114b343d7d154fe98a0 *man/check_tcol.Rd
634d4c7b63315b4dacd2a5d6c8e5f35c *man/check_types.Rd
0a1c05a0b30c5912e09fb726915a9025 *man/check_zero_id.Rd
b2257780bc29e3973a509990a933366c *man/dama.Rd
bf9d7d208fc2b9e595841cefec72949d *man/darwin.Rd
69ddbd064fcf56d1013cb055f6942c87 *man/delta_Fi.Rd
126c9acb508b750cb70dfd89e4671b17 *man/dorcas.Rd
f97637f836c159eb5572f4eac9669fbf *man/evaluate.Rd
c78d66000f7d2e0ca49b10eb4d65bfb8 *man/exp_F.Rd
a1ad09e6a341642c19261633fe37a86b *man/exp_Fa.Rd
d9194b07385da95e8356727ce8c939e2 *man/exp_g.Rd
69a61f663e86f8acac711161f63106e9 *man/g.Rd
0ada2f0ffcc7bf2ef60f9e78d284e715 *man/hwd.Rd
c90fa62a6117deee05ced09b8f7e9530 *man/idx_ancestors.Rd
a075dfe913b5114fd658e412d3aad1e8 *man/ip_F.Rd
a53f63305102f1644a8a433176dadee5 *man/ip_Fa.Rd
0a94639e3ac0a941a69e8443b930eb6c *man/ip_Fij.Rd
758373c47c019be88b506d101b99451b *man/ip_g.Rd
c055940540ea127c16a5c42c257cc4e8 *man/ip_op.Rd
f774b8a2fdc0895d7ad5f8e5ddd95ae6 *man/map_ancestors.Rd
b722e890da904b0248532fbbc6cf90ab *man/op.Rd
201e2a5b273c69acfaea3049abce7c6a *man/ped_clean.Rd
f7e610309649303872da8f5923260651 *man/ped_maternal.Rd
39567553ecac2200492cf05a28f48ff4 *man/ped_rename.Rd
0044b982db5ac503264b5519fb1429ce *man/ped_sort.Rd
a8aaed3bbc70bab952c74b557c3e0fb0 *man/ped_sort_i.Rd
e671fc8e1ba541a1f732212c40d1dc75 *man/pop_Nancestors.Rd
d547e3e521416e4e92d7cb1cad5c867c *man/pop_Ne.Rd
358aef49d9858aa9bed2027a9b1efe22 *man/pop_hwd.Rd
a46f86f480f142536da757db09713c91 *man/pop_t.Rd
7636413818f8dfb290ceffdd176e365c *man/purgeR.Rd
053494c5dac224f62e48b83594dc71a5 *man/rename.Rd
feadfc1df9d1391dd5736882d46c5dd8 *man/reproductive_value.Rd
e886f06781862570798af78102a98545 *man/sample_allele.Rd
084fa2b2adbd0933eadb81fdbed7ea27 *man/search_ancestors.Rd
986942664107cc2ae7bc992f3fdd7252 *man/w_grandoffspring.Rd
1702471d2e8276ce3d1826e0fc3ea529 *man/w_offspring.Rd
a1d67172753dd34553b7a8b3a821e3f2 *man/w_reproductive_value.Rd
6a641fa06019849c32033275c367cbb0 *src/RcppExports.cpp
44efb8861ee3b444efa850b001c0a47d *src/constants.h
5c1b9ee7a43936188bbcda869b4a9d41 *src/error.h
1560f8ef942a22fa6e92297a2758080b *src/fitness.cpp
2e25c85fd9a1cea2694aea4fb969d636 *src/genedrop.cpp
baf1e19b49dcb866e0aca699c6628e06 *src/genedrop.h
97917035d51ccf0d8d550b7ca9b4abf2 *src/inbreeding.cpp
6bd14e50ab17447af71de085f005f522 *src/inbreeding_utils.cpp
9c08ac6754a85b211b7f6545f0093446 *src/inbreeding_utils.h
0b67ca3887095e4c2a08ffda7b2f33a5 *src/mating.cpp
772649dda34d9727211ac81e7ff04e0b *src/opurging.cpp
46f4ee41d22bda2fe98f4400692c9df5 *src/partial.cpp
b7a6cbce82392c030b10a9cc3bba6e08 *src/partial.h
2cef04940b04be65656cdd8d4f684786 *src/populationSize.cpp
a1bf34a20f3297a3abdb9f485eec443d *src/preProcessing.cpp
dc8e75f305534754f7b63991d1f07ebc *src/utils.h
109ab0aed85baa75d0eea8b5d0dc4c8a *tests/testthat.R
9a1e1361e3c59e9073c541a20b0e7a97 *tests/testthat/test_expected.R
e40f5e4e30dca9f166be26c97e5f2bcd *tests/testthat/test_fitness.R
e274338db748e864ac449b8a0e0bacd7 *tests/testthat/test_inbreeding.R
d5ae9b760e97c7e197b5265c0c6bd0ad *tests/testthat/test_missuse.R
50f6c95a5aad4507864523b9ff27ad3a *tests/testthat/test_population_parameters.R
fbcfb6107d17d131025774622e2cf7b2 *tests/testthat/test_preprocessing.R
dc4208c95b34467f8155d365a01f12e1 *vignettes/ip.Rmd
3dea99f73d019ecce9b14f0004c3301b *vignettes/purgeR-tutorial.Rmd
