a35f4143db819c9a9701947e5fe1edeb *DESCRIPTION
b6d37afc6c31568be8c9ff8847a55f7b *NAMESPACE
b81b9b9fc0a90105b3377131a61e4228 *NEWS.md
820e1e07cedb991c5125c0b964b33293 *R/Nancestors.R
edebdd1e1f9268f278da7b163560dc05 *R/Ne.R
7f07ecf355c994cba7349873d979b8e0 *R/RcppExports.R
02eb36a35295553d46d6f139f4e080da *R/check.R
128415e5c7417f8e2e36fccb2c10f3fd *R/clean.R
5d9d0d47d934401cb36b9b4c9219952f *R/data.R
1e59c3896f94e05cbf6dae525d8bee97 *R/expected.R
437a26f5b16a2653a625b959d255ead2 *R/fitness.R
31c38ce8e9420aed2c867760a624ace2 *R/generations.R
49a397aa3e79bc6feda491a05166b223 *R/inbreeding.R
d80ca58a83dcbf5ac3eb7c1c308a4c90 *R/maternal.R
55543017139130c861d6c3011cd8ea62 *R/mating.R
ad0672552bad8c08f611fd4be679cc49 *R/opurging.R
d26a49e4dbd8b38841d3d715faf354a5 *R/partial.R
2fd636180716ed20b5787618bfc4889f *R/purgeR.R
603b09efddc3a668fe3f442210b3560e *R/rename.R
2d0d722a2847b9b27beeeee3935a4da6 *R/sort.R
d8038bd6a7adc56e4efac0760b25bf0b *R/zzz.R
039718b6aac9abcd72b2eb03be5a3120 *build/vignette.rds
e975cfca992a4cd02151aafb35d362eb *data/arrui.rda
6ad1c8c0c55bb9f534999ad8b7eb9634 *data/atlas.rda
381c373d4eb12fa63c71eda8ec5a1450 *data/dama.rda
6aa874d4ed07378257a35453f7078c2c *data/darwin.rda
c031559e03744028582c24e908207c71 *data/datalist
a68d674073c3d15a69caac5d9e867cee *data/dorcas.rda
cd1bf3d6cb1e6eb38a6f5aff17761bbd *inst/doc/ip.R
399276c2f88ed3d793fc651301ff5c5d *inst/doc/ip.Rmd
886e3a154e804fa639a06b4424c44b40 *inst/doc/ip.html
dca949c6c46432f77e37d61aa86ac8f3 *inst/doc/purgeR-tutorial.R
2e4b5d44f95f1d80b54091f11d830978 *inst/doc/purgeR-tutorial.Rmd
1f25c5eac3a6c4f5fb164c571930092d *inst/doc/purgeR-tutorial.html
1025cd19d319e75a50dbe15a6bfab007 *inst/extdata/arrui_op.rda
428746397ef970bfe66984b006638c33 *inst/extdata/dama_rv.rda
75ad4987e8551ff6ef1919b4e57d8709 *inst/extdata/pim.rda
68639712595992ac721006c4ba603859 *inst/extdata/posterior.rda
bf744df0c7f3ae94286a7535ff59e7f1 *man/F.Rd
e2b8548a5dd54dbf8e0391e2d7aa8f98 *man/Fa.Rd
e6e350a1cd9273b70caf2d5c6c7e25d3 *man/Fij_core.Rd
f7dbd27a59f2679d0766fddc348e6164 *man/Fij_core_i_cpp.Rd
f542d57d03ae99f00b01291004d985ac *man/Ne_delta.Rd
56a0fe0e21773152b8f9cc37be494e3a *man/ancestors.Rd
58f27e11f38811e34f2b366a1105ee48 *man/arrui.Rd
07a28965935b1aced8102af200af0497 *man/atlas.Rd
ed95a821314178a8acb6ca3fa329a08b *man/check_Fcol.Rd
c13a03b1af7774a01574896a63acbeab *man/check_Ne.Rd
a917e2b6c0628cb3889ad6d4437950bf *man/check_ancestors.Rd
e50c2037fc2b18dc8a78762ce12c33cd *man/check_basic.Rd
2ec0d2377408ab9175f44d8e85d1b67e *man/check_bool.Rd
23f288e1fb4ee4eca8f5bd0a7bfa5bd1 *man/check_col.Rd
1229f5678386147dd45fc206dab60030 *man/check_d.Rd
15ccbb960a6abfce7f0ec4d4c1fc8550 *man/check_df.Rd
edeb926c3cb022dd8e064bc933169222 *man/check_index.Rd
033c77c7700a9ad4f92be2573bfad532 *man/check_int.Rd
4ae51b34e288236b8c434c4b991ef0c8 *man/check_length.Rd
d57607ac84b2ffc407326e4eaa767f98 *man/check_na.Rd
eb1d7d78aea32767d6628bf2b3352dc1 *man/check_names.Rd
4d7ec8b829cd219463ff92ea11455dcf *man/check_not_col.Rd
c71575fbe5f20e69668cd5e239d98421 *man/check_order.Rd
9e4920bcf859dde0f6a43643dac9c713 *man/check_reference.Rd
d32c3ebb4e8ca56aafef539e8742d342 *man/check_repeat_id.Rd
0084c2b5ef02f114b343d7d154fe98a0 *man/check_tcol.Rd
634d4c7b63315b4dacd2a5d6c8e5f35c *man/check_types.Rd
0a1c05a0b30c5912e09fb726915a9025 *man/check_zero_id.Rd
b2257780bc29e3973a509990a933366c *man/dama.Rd
bf9d7d208fc2b9e595841cefec72949d *man/darwin.Rd
69ddbd064fcf56d1013cb055f6942c87 *man/delta_Fi.Rd
126c9acb508b750cb70dfd89e4671b17 *man/dorcas.Rd
f97637f836c159eb5572f4eac9669fbf *man/evaluate.Rd
c78d66000f7d2e0ca49b10eb4d65bfb8 *man/exp_F.Rd
a1ad09e6a341642c19261633fe37a86b *man/exp_Fa.Rd
d9194b07385da95e8356727ce8c939e2 *man/exp_g.Rd
69a61f663e86f8acac711161f63106e9 *man/g.Rd
0ada2f0ffcc7bf2ef60f9e78d284e715 *man/hwd.Rd
c90fa62a6117deee05ced09b8f7e9530 *man/idx_ancestors.Rd
a075dfe913b5114fd658e412d3aad1e8 *man/ip_F.Rd
a53f63305102f1644a8a433176dadee5 *man/ip_Fa.Rd
2730ea29abec01afe8a64e931d40a1fd *man/ip_Fij.Rd
758373c47c019be88b506d101b99451b *man/ip_g.Rd
1c99ef0a4075c7df10c0984478839bb7 *man/ip_op.Rd
f774b8a2fdc0895d7ad5f8e5ddd95ae6 *man/map_ancestors.Rd
a2416588133cb91dd30341ebc788d22a *man/op.Rd
201e2a5b273c69acfaea3049abce7c6a *man/ped_clean.Rd
f7e610309649303872da8f5923260651 *man/ped_maternal.Rd
39567553ecac2200492cf05a28f48ff4 *man/ped_rename.Rd
0044b982db5ac503264b5519fb1429ce *man/ped_sort.Rd
a8aaed3bbc70bab952c74b557c3e0fb0 *man/ped_sort_i.Rd
c533c750a48ff26a3b65d3d4e53df176 *man/pop_Nancestors.Rd
d547e3e521416e4e92d7cb1cad5c867c *man/pop_Ne.Rd
358aef49d9858aa9bed2027a9b1efe22 *man/pop_hwd.Rd
a46f86f480f142536da757db09713c91 *man/pop_t.Rd
21d2cdea84538b7839cb2a1c45f7c77b *man/purgeR.Rd
053494c5dac224f62e48b83594dc71a5 *man/rename.Rd
feadfc1df9d1391dd5736882d46c5dd8 *man/reproductive_value.Rd
e886f06781862570798af78102a98545 *man/sample_allele.Rd
084fa2b2adbd0933eadb81fdbed7ea27 *man/search_ancestors.Rd
aa2afae2cead94113abc929914ca7dc3 *man/w_grandoffspring.Rd
62a310904c6f1805f2bf9ac2a6d76c62 *man/w_offspring.Rd
a1d67172753dd34553b7a8b3a821e3f2 *man/w_reproductive_value.Rd
1dbe8ac617f8ba5823b5cd5b0936d56d *src/RcppExports.cpp
44efb8861ee3b444efa850b001c0a47d *src/constants.h
5c1b9ee7a43936188bbcda869b4a9d41 *src/error.h
1560f8ef942a22fa6e92297a2758080b *src/fitness.cpp
2e25c85fd9a1cea2694aea4fb969d636 *src/genedrop.cpp
baf1e19b49dcb866e0aca699c6628e06 *src/genedrop.h
97917035d51ccf0d8d550b7ca9b4abf2 *src/inbreeding.cpp
6bd14e50ab17447af71de085f005f522 *src/inbreeding_utils.cpp
9c08ac6754a85b211b7f6545f0093446 *src/inbreeding_utils.h
0b67ca3887095e4c2a08ffda7b2f33a5 *src/mating.cpp
cdb8713e965b2a7ccc8199b2f4774c84 *src/opurging.cpp
4a12b3a1a58e33a0fed960e509507e57 *src/partial.cpp
b7a6cbce82392c030b10a9cc3bba6e08 *src/partial.h
2cef04940b04be65656cdd8d4f684786 *src/populationSize.cpp
a1bf34a20f3297a3abdb9f485eec443d *src/preProcessing.cpp
dc8e75f305534754f7b63991d1f07ebc *src/utils.h
109ab0aed85baa75d0eea8b5d0dc4c8a *tests/testthat.R
9a1e1361e3c59e9073c541a20b0e7a97 *tests/testthat/test_expected.R
e40f5e4e30dca9f166be26c97e5f2bcd *tests/testthat/test_fitness.R
ed2c420bb3db58b1e88bdaba3d0efe0a *tests/testthat/test_inbreeding.R
d5ae9b760e97c7e197b5265c0c6bd0ad *tests/testthat/test_missuse.R
50f6c95a5aad4507864523b9ff27ad3a *tests/testthat/test_population_parameters.R
fbcfb6107d17d131025774622e2cf7b2 *tests/testthat/test_preprocessing.R
399276c2f88ed3d793fc651301ff5c5d *vignettes/ip.Rmd
2e4b5d44f95f1d80b54091f11d830978 *vignettes/purgeR-tutorial.Rmd
