8da4c158ea92171061ff5d65d3344d83 *DESCRIPTION
4c2a9741edd2df2be4b63bea2ce05c3f *NAMESPACE
03b8b7862bbed668609d0daaaff2c391 *NEWS
9b1470d4da76e5fe7add6bad3b5cc651 *R/allopolyploidy.R
e47387660d750bcadf744eda05921009 *R/class_conversion.R
af93c0284b4bdad181e1d9723ab03f4c *R/classes_generics_methods.R
d41eab3e3280081029676596d0e1634f *R/dataexport.R
81c4bc21aaa69988141960858fb0c04c *R/dataimport.R
af3f3b22a69cf4b22df6c28785ae6745 *R/individual_distance.R
0d352b7570229bb6c1ac6cd263114ba2 *R/population_stats.R
ef47fa4029b5adc8515626cd0c7bfdd4 *build/vignette.rds
cbf20eeb5b2890ae164bddb36117ce98 *data/AllopolyTutorialData.RData
a67a0fc43ff6138f1f94095d90220e11 *data/FCRinfo.txt.gz
7a6576a7d8b2a45d910364ae577a06f5 *data/simgen.RData
6ef62896a40727b96ce458ef59ec7291 *data/testgenotypes.RData
0c6ffce6aec7fe91b0cdbebaefdc8ebc *inst/CITATION
657b8bec30522ef69b81b506f6e11d7d *inst/doc/allopolyVignette.R
39ee91b0bc81c458e43415f476c9ce5c *inst/doc/allopolyVignette.Rnw
ed4a59f9ef01313fa35bf407ca0ba1a1 *inst/doc/allopolyVignette.pdf
6fa1a015f4cbc809a8c190477c0da9bc *inst/doc/polysattutorial.R
0d4ea4e8dd866f81a25bb97c993b0c8c *inst/doc/polysattutorial.Rnw
15d6d53d17006c246964b458f255838f *inst/doc/polysattutorial.pdf
18c40b47f6a29ece81fa7a8a4ffac7bb *inst/extdata/ATetraExample.txt
8e7ba05d0f492562b2899a67c51c7873 *inst/extdata/GeneMapperCBA15.txt
3fe87cba334012a41cb3c8e17f8837cf *inst/extdata/GeneMapperCBA23.txt
7916c1760e9497b88b2c56ffb14498c5 *inst/extdata/GeneMapperCBA28.txt
f90df7a32bb6a4cc6b14532981062a9c *inst/extdata/GeneMapperExample.txt
54b318201bec6bc13977327afc2ef7d8 *inst/extdata/POPDISTexample1.txt
64acf09dbdc9a1b2117ca520411d3436 *inst/extdata/POPDISTexample2.txt
4477205c5b8fa749b004d55eacbc1ad1 *inst/extdata/STRandExample.txt
836fe31e0495757ac53d5ca0ab1c9ffd *inst/extdata/dominantExample.txt
cd67d0799a2602ae881346ecf810edc6 *inst/extdata/genodiveExample.txt
572709db60253ba833413d7d3f6ad89e *inst/extdata/simgen.R
fb2bcc052af713ad70fe2da9291c852e *inst/extdata/spagediExample.txt
a3197bc6df63628d0c04c6538a84932c *inst/extdata/structureExample.txt
c129f1a74aeee364c6b0a94ce37e4ef2 *inst/extdata/tetrasatExample.txt
6d27c0ae05235c17f00e3854c8f68697 *man/AllopolyTutorialData.Rd
f27da4a58c28cbbe1d508cacba9437c4 *man/Bruvo.distance.Rd
3c891a027850a5a7838f40b0a26e0fe7 *man/Bruvo2.distance.Rd
ab759c4a2c5869f1cfdefd67a18a1978 *man/FCRinfo.Rd
4d9adbcd18503bfead5bb13929d3851d *man/Lynch.distance.Rd
001d22e87c02e750378479fb7ce63be8 *man/Samples.Rd
ce09e088dd5073602cce4ac634130882 *man/alleleCorrelations.Rd
8847b945ee9dca812e85aeb16d85cec9 *man/alleleDiversity.Rd
ac186471cb2729c30bb3204f73f0ab81 *man/assignClones.Rd
2d93dcc5876bfc141673efb0a7a0a5da *man/calcFst.Rd
fbff73af820d226fe2266e9a8fd8cd80 *man/catalanAlleles.Rd
c4e32f247e1451738d7f7803f72913f5 *man/deSilvaFreq.Rd
bed75e5ee16b2cc4ec6a57bed288f6db *man/deleteSamples.Rd
aacf4ae3b41b7b3d6c05e4411ea9ae2f *man/editGenotypes.Rd
c97e3d27bded104cb0adb6432f1513c9 *man/estimatePloidy.Rd
95ff7a5d226a04c29f660faeb6b4ed85 *man/find.missing.gen.Rd
ca759a4577f3b98178d7fa9abeb89898 *man/freq.to.genpop.Rd
18a162801597ed0bd96bfd29a9d82e06 *man/genambig-class.Rd
e5f9e415ebe8682b9fea49df7768291e *man/genambig.to.genbinary.Rd
3d8916cc343470699e8ccc919be86d9a *man/genbinary-class.Rd
56acb4a4c41d836cdf3d0cdee8e941e0 *man/gendata-class.Rd
70c169c673f17426d6bf8a955d457987 *man/gendata.to.genind.Rd
f80bf37006be3a8e99cb7cbba0347dc0 *man/genotypeDiversity.Rd
da89d7cb0599cbec9a0fc17c72b40712 *man/genotypeProbs.Rd
1c6a258110f8af713dec4396586a26cf *man/isMissing.Rd
099f1519d34a79e17ad2b439797b05c5 *man/meandist.from.array.Rd
f9b6d3518c828625e046fb835b579d95 *man/meandistance.matrix.Rd
d924db0e85bb80e6ebd682d242549a06 *man/merge-methods.Rd
722992beb57a134698af4f1c7e266fed *man/mergeAlleleAssignments.Rd
4b7bad79c93d33c2d73fcee608c397a3 *man/pld.Rd
a5a6cba12d371328aaaab73e8dac3bc8 *man/ploidysuper-class.Rd
d7e60d62224fe3353ebb1f3fe2343770 *man/polysat-internal.Rd
8acd24ab47164eb918260dab01831078 *man/read.ATetra.Rd
4efa97a19b7aa39e4f3070426e9966d3 *man/read.GeneMapper.Rd
bf06799ed80dcf29ab3d69b3781a20d7 *man/read.GenoDive.Rd
c0dbee1aaaaa7969efa7918a83b156f0 *man/read.POPDIST.Rd
a2776a4a67e2794559c122fa27a2c585 *man/read.SPAGeDi.Rd
b505209e10bad97856d73d1bf15b2ff0 *man/read.STRand.Rd
761f90b22d1733c507f2c7c7217c7845 *man/read.Structure.Rd
9c59a4d325b9d16cfa2e0d58558631cb *man/read.Tetrasat.Rd
21f47c12a67b6a529750e812875ab2fe *man/recodeAllopoly.Rd
fa5857690a947309b3e060c86bfcd279 *man/reformatPloidies.Rd
cf4c2588c92d55b702c6f16433eafea6 *man/simAllopoly.Rd
cf9e9d5899f749cce29abd4e6af7ffb2 *man/simgen.Rd
a5afac596d35246b352dd492df12e659 *man/simpleFreq.Rd
cec84d98b61e4fc94789ea70c7eb1f32 *man/testgenotypes.Rd
74639f4761bfe3c7d9a0fcda56d8252a *man/viewGenotypes.Rd
bff50d97af2e125eb0105563542f2174 *man/write.ATetra.Rd
74558b28494b3c6a7603b283b89dfbb9 *man/write.GeneMapper.Rd
8781296f1a8a24f9f294c39d7341fa61 *man/write.GenoDive.Rd
12e9182f5ac936f83a5c94fee146c496 *man/write.POPDIST.Rd
cf8f9edf4591944ff24632d6148a1057 *man/write.SPAGeDi.Rd
f677178dded60f2461d43b2d10fc76b9 *man/write.Structure.Rd
1e7a83905b8df9d25dc5c689792c383c *man/write.Tetrasat.Rd
54cb3223d6e60ce73913913856c9274f *man/write.freq.SPAGeDi.Rd
18c40b47f6a29ece81fa7a8a4ffac7bb *vignettes/ATetraExample.txt
8e7ba05d0f492562b2899a67c51c7873 *vignettes/GeneMapperCBA15.txt
3fe87cba334012a41cb3c8e17f8837cf *vignettes/GeneMapperCBA23.txt
7916c1760e9497b88b2c56ffb14498c5 *vignettes/GeneMapperCBA28.txt
f90df7a32bb6a4cc6b14532981062a9c *vignettes/GeneMapperExample.txt
54b318201bec6bc13977327afc2ef7d8 *vignettes/POPDISTexample1.txt
64acf09dbdc9a1b2117ca520411d3436 *vignettes/POPDISTexample2.txt
4477205c5b8fa749b004d55eacbc1ad1 *vignettes/STRandExample.txt
39ee91b0bc81c458e43415f476c9ce5c *vignettes/allopolyVignette.Rnw
836fe31e0495757ac53d5ca0ab1c9ffd *vignettes/dominantExample.txt
cd67d0799a2602ae881346ecf810edc6 *vignettes/genodiveExample.txt
0d4ea4e8dd866f81a25bb97c993b0c8c *vignettes/polysattutorial.Rnw
fb2bcc052af713ad70fe2da9291c852e *vignettes/spagediExample.txt
a3197bc6df63628d0c04c6538a84932c *vignettes/structureExample.txt
c129f1a74aeee364c6b0a94ce37e4ef2 *vignettes/tetrasatExample.txt
6db09f235635eda3dc917fad877e5187 *vignettes/vignettebuild/AllopolyTutorialDist.RData
c35a6e9034a9e1eb5df67b656f242d68 *vignettes/vignettebuild/simfreq.txt
41445b0af4b0f7fe635b7c54128f400d *vignettes/vignettebuild/simgenPloidies2.txt
231dab56b1a368704da98387a7593687 *vignettes/vignettebuild/testmat.RData
1148b3619c946ae9337da951b8489469 *vignettes/vignettebuild/testmat2.RData
81f91c416b144a4d417554b829cccea9 *vignettes/vignettebuild/testmat4.RData
41ade431613bdc350e9dd9d40bc7cd44 *vignettes/vignettebuild/testmat5.RData
