Package: mrds
Imports: optimx, mgcv, Rsolnp
Maintainer: Jeff Laake <jeff.laake@noaa.gov>
License: GPL (>= 2)
Title: Mark-Recapture Distance Sampling (mrds)
LazyLoad: yes
Author: Jeff Laake <jeff.laake@noaa.gov>, David Borchers
        <dlb@mcs.st-and.ac.uk>, Len Thomas <len@mcs.st-and.ac.uk>,
        David Miller <dlm22@st-and.ac.uk> and Jon Bishop
        <jonb@mcs.st-and.ac.uk>
Description: This package implements mark-recapture distance sampling
        methods as described in D.L. Borchers, W. Zucchini and Fewster,
        R.M. (1988), "Mark-recapture models for line transect surveys",
        Biometrics 54: 1207-1220. and Laake, J.L. (1999) "Distance
        sampling with independent observers: Reducing bias from
        heterogeneity by weakening the conditional independence
        assumption." in Amstrup, G.W., Garner, S.C., Laake, J.L.,
        Manly, B.F.J., McDonald, L.L. and Robertson, D.G. (eds) "Marine
        mammal survey and assessment methods", Balkema, Rotterdam:
        137-148 and Borchers, D.L., Laake, J.L., Southwell, C. and
        Paxton, C.L.G. "Accommodating unmodelled heterogeneity in
        double-observer distance sampling surveys". 2006.  Biometrics
        62:372-378.)
Version: 2.0.5
Date: 2012-3-23
Depends: R (>= 2.0.0),optimx,Rsolnp
Suggests: testthat
Collate: 'adj.check.order.R' 'adjfct.cos.R' 'adjfct.herm.R'
        'adjfct.poly.R' 'apex.gamma.R' 'assign.default.values.R'
        'assign.par.R' 'average.line.R' 'calcp.mrds.R' 'cdf.ds.R'
        'cds.R' 'coef.ds.R' 'coef.io.fi.R' 'coef.io.R' 'coef.rem.fi.R'
        'coef.rem.R' 'coef.trial.fi.R' 'coef.trial.R' 'compute.Nht.R'
        'covered.region.dht.R' 'create.ddfobj.R' 'create.model.frame.R'
        'create.varstructure.R' 'ddf.ds.R' 'ddf.gof.R' 'ddf.io.fi.R'
        'ddf.io.R' 'ddf.R' 'ddf.rem.fi.R' 'ddf.rem.R' 'ddf.trial.fi.R'
        'ddf.trial.R' 'DeltaMethod.R' 'det.tables.R'
        'detfct.fit.mono.R' 'detfct.fit.opt.R' 'detfct.fit.R'
        'detfct.R' 'dht.deriv.R' 'dht.R' 'dht.se.R' 'ds.function.r'
        'errors.R' 'flnl.R' 'flt.lnl.R' 'flt.var.R' 'fpt.lnl.r' 'g0.R'
        'getpar.R' 'gof.ds.R' 'gof.io.fi.R' 'gof.io.R' 'gof.rem.fi.R'
        'gof.rem.R' 'gof.trial.fi.R' 'gof.trial.R' 'gstdint.R'
        'hermite.poly.R' 'histline.R' 'integratedetfct.logistic.R'
        'integratedetfct.R' 'integratelogistic.analytic.R'
        'integratelogistic.R' 'integratelogisticdup.R' 'io.glm.R'
        'is.linear.logistic.R' 'is.logistic.constant.R'
        'keyfct.gamma.R' 'keyfct.hn.R' 'keyfct.hz.R' 'logisticbyx.R'
        'logisticbyz.R' 'logisticdetfct.R' 'logisticdupbyx.R' 'logit.R'
        'mcds.R' 'mrds-package.R' 'NCovered.ds.R' 'NCovered.io.fi.R'
        'NCovered.io.R' 'NCovered.R' 'NCovered.rem.fi.R'
        'NCovered.rem.R' 'NCovered.trial.fi.R' 'NCovered.trial.R'
        'p.det.R' 'pcramer.R' 'pdot.dsr.integrate.logistic.R' 'pks.R'
        'plot_cond.R' 'plot_uncond.R' 'plot.det.tables.R' 'plot.ds.R'
        'plot.io.fi.R' 'plot.io.R' 'plot.rem.fi.R' 'plot.rem.R'
        'plot.trial.fi.R' 'plot.trial.R' 'predict.ds.R'
        'predict.io.fi.R' 'predict.io.R' 'predict.rem.fi.R'
        'predict.rem.R' 'predict.trial.fi.R' 'predict.trial.R'
        'print.ddf.gof.R' 'print.det.tables.R' 'print.dht.R'
        'print.summary.ds.R' 'print.summary.io.fi.R'
        'print.summary.io.R' 'print.summary.rem.fi.R'
        'print.summary.rem.R' 'print.summary.trial.fi.R'
        'print.summary.trial.R' 'prob.deriv.R' 'prob.se.R'
        'process.data.R' 'qqplot.ddf.R' 'rem.glm.R' 'scalevalue.R'
        'setbounds.R' 'setcov.R' 'sethazard.R' 'setinitial.ds.R'
        'sim.mix.R' 'summary.ds.R' 'summary.io.fi.R' 'summary.io.R'
        'summary.rem.fi.R' 'summary.rem.R' 'summary.trial.fi.R'
        'summary.trial.R' 'survey.region.dht.R' 'tablecgf.R'
        'test.breaks.R' 'varn.R' 'zzz.R'
Packaged: 2012-03-27 14:50:20 UTC; JLaake
Repository: CRAN
Date/Publication: 2012-03-27 18:01:59
