a1394af3eef82899c653b648459be1c6 *DESCRIPTION
e66e614738dfa021a3a21c766ee7b940 *NAMESPACE
f7981051fdc87cd0143a44803371667d *R/EM.R
5ac7a327cb6e1f411801d85cb0216dee *R/Gibbs.R
9601c3cccbb67a14d787cdf2be14eb24 *R/computePenalty.R
f590768dbed832890df0ea1db8fd39e6 *R/getArgs.R
56107e17c3594b8cb228ded8ec364066 *R/metaMix-package.r
cffe0656f783f960d088b89a6a3078d3 *R/step1_preprocess.R
11d3397fa1e5b08ab81af84e9c67afb7 *R/step2_allInclusive_MM.R
16484b7b219fd07106937e622438c87e *R/step3_parallelTemper.R
3fec16ed8fe0232c8f74cf8af22edf7e *R/step3_parallelTemper_nucl.R
1505cc46ecb4301d7f6ed7d9b8b507ed *R/step4_bayesModelAver.R
a80ff79ae5bd51e3928d200932b61940 *R/zzz.R
364413a8569dba7c2d700554cd514631 *build/vignette.rds
b873ed41550485a23a9ef1d07c340dcf *data/step1.RData
2c2debad39291aa20f133159ec44ad7f *data/step2.RData
048704683a9a6c3cd1c955c510e40788 *data/step3.RData
eaea8c38db30c6e0cefb736fcc994087 *inst/doc/guide.R
03a8857d3f74dd307bb5b668ce392843 *inst/doc/guide.Rnw
a66f768ea75dbd67c86e2630fa5518f2 *inst/doc/guide.pdf
42a7d808b5f0df7e6030c9f32c5eca6f *inst/extdata/PT_plots.RData
f943aed8a86d436f375cd866e5963f5a *inst/extdata/blastOut_custom.tab
12ae20acc7ac927796fbd9c6d9182e03 *inst/extdata/blastOut_default.tab
06059a4c8f81ef07f28c5263162fdcad *inst/extdata/dat1/blastOut.tab
f05b181d7495f430fd9f20425eaf2d39 *inst/extdata/dat1/blastOut2.tab
04a476a3c0632c916934ff0e02dcd6b4 *inst/extdata/dat1/blastOut_old.tab
db8337ab6f2dd25a384ffdcaa7f9d0e5 *inst/extdata/dat1/gi_taxid_prot_example.dmp
996013ca4f4845279c8f0bea245fed2c *inst/extdata/dat1/names_example.dmp
2d558bd382dfb88a42d9f972843da2c0 *inst/extdata/dat1/names_example.dmp.bck
a02367cf902fe625cd10a5981d337124 *inst/extdata/dat1/read_lengths.tab
f59356a998f4d3b68b20a826df27f4cc *inst/extdata/dat1/read_weights.tab
3c8d97041c94105846438dbb84c3a260 *inst/extdata/dat1/remove.sh
1029fa8a7afd3b88aa09f31a921c38fb *inst/extdata/dat1/removeID.tab
b79ab5267fecd9e2deee8c95c3d4060b *inst/extdata/dat1/step2.RData
375deb784d5c1be0c3d73793d4eaabb1 *inst/extdata/dat1/step3.RData
075e56483ff192e92762d986c3c7a4e9 *inst/extdata/dat1/step4.RData
7c3c7148191066a3a7e7aface295344f *inst/extdata/gi_taxid_prot_example.dmp
969c0d1f53be01283db36d9b2ddea6bd *inst/extdata/names_example.dmp
0a3116df0500ab3b0826fbaea931c3ac *inst/extdata/read_lengths.tab
6da431dbc9f4fbcfc47e177bcb2d9a22 *inst/extdata/read_weights.tab
34951018b9e1d31ccddec2d51e87c17c *man/bayes.model.aver.Rd
6ce1b9e9316c777601fe1f40adc657bb *man/generative.prob.Rd
91fc553a31865685ebf8486c5f9590a4 *man/parallel.temper.Rd
8057c802f6aed45f4b83b5c7aefcab48 *man/parallel.temper.nucl.Rd
816f2855eabf38ab57ce3383894c3502 *man/reduce.space.Rd
96927c5374e301f9e60fd06727de6a61 *man/step1.Rd
55f3e04c84e04a5656501483056b94fb *man/step2.Rd
750cf9fdcb6c749591fd1be146f23c98 *man/step3.Rd
14cd8c3d566b0b93a63b2df78347b84c *src/fast_multinom_weight.cpp
03a8857d3f74dd307bb5b668ce392843 *vignettes/guide.Rnw
