# Generated by roxygen2 (4.0.1): do not edit by hand

export(Jaatha.confidenceIntervals)
export(Jaatha.getCIsFromLogs)
export(Jaatha.getLikelihoods)
export(Jaatha.getStartingPoints)
export(Jaatha.initialSearch)
export(Jaatha.initialize)
export(Jaatha.refinedSearch)
export(Jaatha.setSeqgenExecutable)
export(calculateJsfs)
export(dm.addGrowth)
export(dm.addMigration)
export(dm.addMutation)
export(dm.addMutationRateHeterogenity)
export(dm.addOutgroup)
export(dm.addParameter)
export(dm.addRecombination)
export(dm.addSampleSize)
export(dm.addSizeChange)
export(dm.addSpeciationEvent)
export(dm.addSummaryStatistic)
export(dm.addSymmetricMigration)
export(dm.createDemographicModel)
export(dm.createThetaTauModel)
export(dm.getGroups)
export(dm.getLociLength)
export(dm.getLociNumber)
export(dm.setLociLength)
export(dm.setLociNumber)
export(dm.setMutationModel)
export(dm.simSumStats)
exportClasses(Jaatha)
importFrom(Rcpp,evalCpp)
importFrom(methods,new)
importFrom(methods,representation)
importFrom(parallel,mclapply)
importFrom(phyclust,ms)
importFrom(reshape2,melt)
useDynLib(jaatha)
