Package: jaatha
Version: 2.0.2
Date: 2013-01-21
License: GPL (>= 3)
Title: A Fast Parameter Estimation Method for Evolutionary Biology
Author: Lisha Mathew, Paul R. Staab and Dirk Metzler
Maintainer: Paul R. Staab <staab@biologie.uni-muenchen.de>
Description: Jaatha is a composite likelihood method for inferring
        evolutionary parameters using genetic data. Given a model of
        the evolutionary history of two biological populations as well
        as SNP data from multiple individuals from each population, it
        estimates model parameters like the time of separation of both
        species.
Depends: R (>= 2.14.2), methods, foreach (>= 1.2.0-1), phyclust (>=
        0.1-14), ape (>= 2.7), Rcpp (>= 0.9.9)
LinkingTo: Rcpp
Suggests: doMC (>= 1.1.1)
Collate: 'aaa_SimProgram.R' 'Block.R' 'DataProcessor.R'
        'DemographicModel.R' 'helper_functions.R' 'Jaatha.R'
        'ModelFitting.R' 'parallelization.R' 'read_fasta.R'
        'sim_program_ms.R' 'sim_program_seqgen.R' 'Simulator.R'
        'summary_statistics.R'
Packaged: 2013-01-21 12:13:20 UTC; paul
Repository: CRAN
Date/Publication: 2013-01-21 15:09:50
